Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45849 | Canola | nucleus, plastid | 97.08 | 95.14 |
| AT1G68840.1 | Thale cress | nucleus | 81.63 | 79.55 |
| CDY24391 | Canola | nucleus | 69.68 | 70.71 |
| CDX84999 | Canola | nucleus | 72.01 | 69.77 |
| CDY36099 | Canola | nucleus | 70.85 | 69.43 |
| CDY16133 | Canola | nucleus | 72.01 | 68.99 |
| CDX97996 | Canola | nucleus | 63.27 | 66.77 |
| CDY61361 | Canola | nucleus | 62.97 | 66.06 |
| CDY72302 | Canola | nucleus | 61.22 | 64.42 |
| CDY58354 | Canola | nucleus | 60.93 | 64.11 |
| CDY40973 | Canola | nucleus | 56.85 | 61.9 |
| CDX99755 | Canola | nucleus | 58.6 | 59.12 |
| KRH34761 | Soybean | nucleus | 59.18 | 57.83 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 53.06 | 56.52 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 61.81 | 56.08 |
| KRG92025 | Soybean | nucleus | 59.18 | 56.08 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 48.4 | 55.7 |
| CDX83547 | Canola | nucleus | 52.48 | 55.56 |
| KRH75484 | Soybean | nucleus | 60.64 | 54.17 |
| GSMUA_Achr10P... | Banana | nucleus | 46.06 | 54.11 |
| KRH70603 | Soybean | nucleus | 61.81 | 52.87 |
| Solyc05g009790.1.1 | Tomato | nucleus | 60.64 | 52.66 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 44.02 | 52.25 |
| PGSC0003DMT400002125 | Potato | nucleus | 60.35 | 52.01 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 46.65 | 51.61 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 44.02 | 51.36 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 55.69 | 51.07 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 38.78 | 50.57 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 28.57 | 50.52 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 55.1 | 50.4 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 55.69 | 49.87 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 21.57 | 49.33 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 54.52 | 49.21 |
| Os05t0549800-01 | Rice | nucleus | 48.98 | 48.98 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 53.06 | 48.53 |
| TraesCS1A01G372300.1 | Wheat | nucleus | 55.39 | 48.47 |
| TraesCS1B01G392300.1 | Wheat | nucleus | 55.1 | 48.34 |
| Zm00001d043782_P001 | Maize | nucleus | 54.81 | 48.33 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 48.98 | 48.0 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 54.81 | 47.96 |
| Os01t0693400-01 | Rice | nucleus | 54.81 | 47.84 |
| KXG22484 | Sorghum | nucleus, plastid | 56.56 | 47.55 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 53.94 | 47.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.02 | 46.79 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 54.81 | 46.31 |
| EES03472 | Sorghum | nucleus, plastid | 55.39 | 46.0 |
| TraesCS1B01G392000.1 | Wheat | nucleus | 54.23 | 45.26 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 53.94 | 44.9 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 54.81 | 44.87 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 40.52 | 44.84 |
| TraesCS1A01G372200.1 | Wheat | nucleus | 53.94 | 44.79 |
| Zm00001d011639_P001 | Maize | nucleus | 52.48 | 44.44 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 53.35 | 44.1 |
| TraesCS1B01G392200.1 | Wheat | nucleus, plastid | 53.35 | 43.99 |
| CDY67348 | Canola | nucleus | 18.37 | 42.0 |
| TraesCS1A01G372100.1 | Wheat | nucleus | 53.06 | 41.18 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 47.52 | 39.56 |
| CDX73868 | Canola | nucleus | 24.49 | 35.59 |
| CDY62470 | Canola | nucleus | 23.32 | 35.09 |
| CDY43751 | Canola | nucleus | 24.78 | 34.98 |
| CDY43060 | Canola | cytosol | 16.62 | 34.97 |
| CDX84162 | Canola | nucleus | 24.49 | 34.57 |
| CDX75073 | Canola | nucleus | 24.78 | 34.27 |
| CDY08512 | Canola | nucleus | 24.78 | 34.27 |
| CDY01036 | Canola | nucleus | 24.78 | 33.07 |
| CDX80053 | Canola | nucleus | 27.7 | 31.99 |
| CDY41564 | Canola | nucleus | 27.7 | 31.99 |
| CDY65812 | Canola | nucleus | 25.95 | 31.67 |
| CDY69432 | Canola | nucleus | 25.66 | 31.65 |
| CDX67872 | Canola | nucleus | 26.24 | 31.58 |
| CDX76605 | Canola | nucleus | 26.82 | 31.51 |
| CDY11388 | Canola | nucleus | 26.82 | 31.51 |
| CDY46564 | Canola | nucleus | 30.9 | 31.27 |
| CDY27515 | Canola | nucleus | 27.7 | 31.25 |
| CDY47260 | Canola | nucleus | 24.2 | 31.09 |
| CDY29599 | Canola | nucleus | 29.45 | 31.08 |
| CDY48008 | Canola | nucleus | 27.41 | 30.92 |
| CDY51249 | Canola | nucleus | 30.32 | 30.68 |
| CDY37109 | Canola | nucleus | 29.74 | 30.63 |
| CDY22814 | Canola | nucleus | 30.03 | 30.56 |
| CDX83351 | Canola | nucleus | 27.41 | 30.52 |
| CDY22826 | Canola | nucleus | 30.03 | 30.47 |
| CDY29620 | Canola | nucleus | 30.03 | 29.94 |
| CDY35575 | Canola | nucleus | 30.03 | 29.86 |
| CDY50908 | Canola | nucleus | 27.41 | 29.84 |
| CDY37130 | Canola | nucleus | 29.45 | 29.79 |
| CDX80996 | Canola | nucleus | 23.62 | 29.45 |
| CDY25209 | Canola | nucleus | 30.03 | 29.01 |
| CDY15208 | Canola | nucleus | 26.82 | 28.57 |
| CDY37108 | Canola | nucleus, plastid | 28.57 | 28.57 |
| CDY58763 | Canola | nucleus | 26.24 | 28.3 |
| CDY58764 | Canola | nucleus | 26.24 | 28.12 |
| CDY22801 | Canola | nucleus | 27.99 | 27.59 |
| CDX90001 | Canola | nucleus | 27.11 | 27.03 |
| CDX97251 | Canola | nucleus | 26.24 | 26.55 |
| CDY07140 | Canola | nucleus | 23.03 | 25.82 |
| CDY49614 | Canola | nucleus | 22.74 | 25.16 |
| CDX98911 | Canola | nucleus | 15.45 | 22.18 |
| CDY70080 | Canola | nucleus | 15.45 | 22.18 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | GO:A0A078CWN5 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | EnsemblPlants:CDX81561 | ProteinID:CDX81561 | ProteinID:CDX81561.1 | InterPro:DNA-bd_dom_sf |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00135275001 |
| InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF00847 | PFAM:PF02362 |
| PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF9 | SMART:SM00380 | SMART:SM01019 |
| SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0004EF00A7 | SEG:seg | : | : |
Description
BnaC02g18650D
Coordinates
chrLK031825:+:1500065..1501096
Molecular Weight (calculated)
38325.3 Da
IEP (calculated)
10.078
GRAVY (calculated)
-0.465
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSCIDESS STSESFSPAT TTAAKFSAPP LPPLRLNRMG SGGSNVVLDS KNGVDIDSRK LSSSKYKGVV PQPNGRWGAQ IYVKHQRVWL GTFSDEEEAA
101: HSYDIAARKF RGRDAVVNFK TFLASEDDNG ELCFLEAHSK AEIVDMLRKH TYADELAQSN KRNGANTNTI QSDTVSRTRE VLFEKVVTPS DVGKLNRLVI
201: PKQHAEKHFP LPSLSVTKGV LINFEDVTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVTFER STGSDRQLYI DWKRSGPSKN PVQVVVRLFG
301: VDIFNVTSTK PSNVVDACGG KRSRDVDMFA LRCSKKHAII NTL
101: HSYDIAARKF RGRDAVVNFK TFLASEDDNG ELCFLEAHSK AEIVDMLRKH TYADELAQSN KRNGANTNTI QSDTVSRTRE VLFEKVVTPS DVGKLNRLVI
201: PKQHAEKHFP LPSLSVTKGV LINFEDVTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVTFER STGSDRQLYI DWKRSGPSKN PVQVVVRLFG
301: VDIFNVTSTK PSNVVDACGG KRSRDVDMFA LRCSKKHAII NTL
001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL
Arabidopsis Description
RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.