Factsheet for HORVU3Hr1G010190.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G010200.1	Barley	mitochondrion	54.43	95.43
TraesCS3D01G052400.1	Wheat	nucleus	83.07	90.37
TraesCSU01G227200.1	Wheat	nucleus	79.95	87.46
TraesCSU01G231000.1	Wheat	mitochondrion, nucleus	49.48	87.16
TraesCS3B01G065000.1	Wheat	mitochondrion, nucleus	49.48	87.16
TraesCS3B01G065100.1	Wheat	nucleus	77.34	84.86
HORVU3Hr1G010240.1	Barley	nucleus	76.56	84.48
HORVU4Hr1G082030.2	Barley	nucleus	48.96	74.02
Os01t0141000-01	Rice	nucleus, plastid	66.67	70.14
Zm00001d039907_P001	Maize	nucleus	63.8	64.81
EES02511	Sorghum	nucleus	65.36	64.69
HORVU3Hr1G010100.2	Barley	nucleus	50.26	60.31
HORVU3Hr1G010060.1	Barley	nucleus	50.78	55.4
HORVU4Hr1G082090.2	Barley	mitochondrion	48.96	54.65
HORVU4Hr1G074300.4	Barley	nucleus	19.53	50.0
HORVU3Hr1G064590.1	Barley	nucleus	22.92	45.36
HORVU3Hr1G064640.4	Barley	nucleus	44.01	44.47
HORVU1Hr1G082670.6	Barley	nucleus	43.49	42.49
HORVU3Hr1G010140.3	Barley	nucleus	42.45	42.01
HORVU0Hr1G022200.1	Barley	nucleus	20.05	38.5
HORVU7Hr1G002230.1	Barley	nucleus	20.05	35.0
HORVU5Hr1G040620.4	Barley	nucleus	19.27	27.01
HORVU1Hr1G051780.2	Barley	nucleus	20.57	26.96
HORVU4Hr1G021650.22	Barley	nucleus	19.27	26.52
HORVU3Hr1G010260.2	Barley	mitochondrion	13.54	26.26
HORVU7Hr1G046950.1	Barley	nucleus	17.97	25.18
HORVU4Hr1G084950.3	Barley	nucleus	21.09	23.75
HORVU6Hr1G066190.2	Barley	nucleus	24.22	22.74

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	UniProt:A0A287K2L3	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:B3_DNA-bd	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU3Hr1G010190	EnsemblPlants:HORVU3Hr1G010190.5	InterPro:IPR001471	InterPro:IPR003340
InterPro:IPR015300	InterPro:IPR036955	PFAM:PF00847	PFAM:PF02362	PFscan:PS50863	PFscan:PS51032
PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171
UniParc:UPI000B4741B4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:22352567..22354038

Molecular Weight (calculated)

41809.2 Da

IEP (calculated)

10.064

GRAVY (calculated)

-0.483

Length

384 amino acids

Sequence
(BLAST)

001: GYPLASQPTQ AHIHTLQRKH TRQENKENQQ AMGMEILSST VEHCSQYSSS ASTATTESGA AGRSTTALSL PVAITDESVT SRSASAQPAS SRFKGVVPQP
101: NGRWGSQIYE RHARVWLGTF PDQDSAARAY DVASLRYRGR DAATNFPCAA AEAELAFLTA HSKAEIVDML RKHTYADELR QGLRRGRGMG ARAQPTPSWA
201: RVPLFEKAVT PSDVGKLNRL VVPKQHAEKH FPLKCTAETT TTTGNGVLLN FEDGEGKVWR FRYSYWNSSQ SYVLTKGWSS FVREKGLGAG DSIVFSSSAY
301: GQEKQLFINC KKNTTMNGGK TALPLPVVET AKGEQDHVVK LFGVDIAGVK RVRAATGELG PPELFKRQSV AHGQHSPSLG VFAL

Best Arabidopsis Sequence Match ( AT1G13260.1 )
(BLAST)

001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS

Arabidopsis Description

RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.