Factsheet for GSMUA_Achr3P19210_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P02600_001	Banana	nucleus	67.16	69.95
GSMUA_Achr6P35600_001	Banana	nucleus	60.7	50.41
GSMUA_Achr6P13140_001	Banana	nucleus	60.2	48.99
TraesCS5B01G126200.1	Wheat	nucleus	61.69	46.79
TraesCS5A01G127100.1	Wheat	nucleus	61.69	46.62
TraesCS5D01G134700.1	Wheat	nucleus	61.69	46.62
TraesCS2B01G482400.1	Wheat	nucleus	60.2	45.32
TraesCS2D01G460900.1	Wheat	nucleus	60.2	45.32
TraesCS2A01G460700.1	Wheat	nucleus	59.7	45.11
Os11t0156000-01	Rice	nucleus	60.2	43.37
Zm00001d023446_P001	Maize	nucleus	60.2	42.76
GSMUA_Achr11P...	Banana	nucleus	39.3	42.7
KXG27771	Sorghum	nucleus	58.21	42.7
TraesCS4B01G117100.1	Wheat	nucleus	58.21	41.94
TraesCS4A01G198300.2	Wheat	nucleus	57.71	41.58
TraesCS4D01G114900.1	Wheat	nucleus	57.71	41.13
GSMUA_Achr9P08980_001	Banana	nucleus	32.84	40.74
HORVU5Hr1G040620.4	Barley	nucleus	53.73	39.42
CDY43751	Canola	nucleus	46.77	38.68
KXG22988	Sorghum	plastid	61.19	38.44
Bra017262.1-P	Field mustard	nucleus	46.77	38.37
CDX84162	Canola	nucleus	46.27	38.27
AT2G36080.1	Thale cress	nucleus	46.27	38.11
HORVU4Hr1G021650.22	Barley	nucleus	52.74	37.99
CDX75073	Canola	nucleus	46.27	37.5
Bra005301.1-P	Field mustard	nucleus	46.27	37.5
Bra001411.1-P	Field mustard	nucleus	43.78	37.29
CDX73868	Canola	nucleus	43.78	37.29
Zm00001d052591_P001	Maize	nucleus	55.72	36.48
CDY08512	Canola	nucleus	44.78	36.29
CDY01036	Canola	nucleus	46.27	36.19
CDY62470	Canola	nucleus	40.8	35.96
Bra034828.1-P	Field mustard	nucleus	45.77	35.66
GSMUA_Achr4P30170_001	Banana	nucleus	41.79	33.73
Bra041023.1-P	Field mustard	nucleus	44.28	33.71
VIT_08s0007g02810.t01	Wine grape	nucleus	47.76	33.68
GSMUA_Achr4P26430_001	Banana	nucleus	41.79	33.6
KRG96220	Soybean	nucleus	49.25	33.11
Bra005886.1-P	Field mustard	nucleus	43.78	32.96
CDY47260	Canola	nucleus	43.78	32.96
PGSC0003DMT400072354	Potato	nucleus	46.27	32.29
AT5G06250.4	Thale cress	nucleus	45.27	32.04
KRH67965	Soybean	nucleus	45.77	31.94
Solyc10g083210.1.1	Tomato	nucleus	47.26	30.84
GSMUA_Achr5P12850_001	Banana	nucleus	31.84	30.33
CDX80996	Canola	nucleus	41.29	30.18
KRH32791	Soybean	nucleus	49.75	29.67
GSMUA_Achr7P04630_001	Banana	nucleus	29.85	29.13
KRH72242	Soybean	nucleus	49.75	29.07
Os12t0157000-01	Rice	cytosol, nucleus	29.85	28.57
GSMUA_Achr1P03600_001	Banana	nucleus	45.77	27.88
GSMUA_Achr6P01420_001	Banana	nucleus	43.28	27.53
GSMUA_Achr4P24970_001	Banana	nucleus	31.84	27.23
PGSC0003DMT400023077	Potato	nucleus	45.27	27.16
Solyc09g010230.1.1	Tomato	nucleus	46.27	26.96
GSMUA_Achr1P05400_001	Banana	nucleus	39.8	26.85
GSMUA_Achr2P22560_001	Banana	nucleus	41.29	26.77
GSMUA_Achr1P21250_001	Banana	nucleus	38.81	26.53
GSMUA_Achr5P09950_001	Banana	nucleus	42.29	26.4
GSMUA_Achr4P12210_001	Banana	nucleus	29.35	26.34
GSMUA_AchrUn_...	Banana	cytosol	30.85	25.73
GSMUA_Achr6P18320_001	Banana	nucleus	43.28	25.59
AT3G11580.3	Thale cress	cytosol, endoplasmic reticulum, nucleus	46.77	25.34
GSMUA_Achr5P20340_001	Banana	nucleus	40.8	24.33
CDX98911	Canola	nucleus	28.86	24.27
CDY70080	Canola	nucleus	28.86	24.27
Bra009171.1-P	Field mustard	nucleus	28.86	24.27
GSMUA_Achr5P10220_001	Banana	nucleus	32.84	24.26
GSMUA_Achr9P18780_001	Banana	nucleus	34.33	24.13
GSMUA_Achr2P00400_001	Banana	nucleus	33.33	23.26
GSMUA_Achr2P10230_001	Banana	nucleus	33.83	22.37
GSMUA_Achr6P09880_001	Banana	nucleus	30.85	21.45
GSMUA_AchrUn_...	Banana	nucleus	39.8	21.39
GSMUA_Achr3P29380_001	Banana	nucleus	25.87	19.77
GSMUA_Achr4P06710_001	Banana	nucleus	34.33	19.71
GSMUA_Achr3P21100_001	Banana	nucleus	40.3	19.66
GSMUA_Achr9P21470_001	Banana	nucleus	28.86	18.71
GSMUA_Achr4P03670_001	Banana	nucleus	27.36	18.71
GSMUA_Achr10P...	Banana	nucleus	25.87	17.81
GSMUA_Achr8P14650_001	Banana	nucleus	32.34	15.7
GSMUA_Achr11P...	Banana	nucleus	23.88	14.29

Protein Annotations

MapMan:15.5.5.3	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G19210_001	EnsemblPlants:GSMUA_Achr3P19210_001	EnsemblPlants:GSMUA_Achr3T19210_001	InterPro:IPR003340	InterPro:IPR015300
UniProt:M0SFY7	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF4	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI000296B822	SEG:seg	:	:	:

Description

B3 domain-containing protein Os11g0156000 [Source:GMGC_GENE;Acc:GSMUA_Achr3G19210_001]

Coordinates

chr3:+:20567235..20568021

Molecular Weight (calculated)

23218.3 Da

IEP (calculated)

7.440

GRAVY (calculated)

-0.754

Length

201 amino acids

Sequence
(BLAST)

001: MAQHHPQARA WESAMLLHHR YYHHLYHSEQ EEAPHEREHM FEKPLTPSDV GKLNRLVIPK QHAERYFPLD GGSAEGGLLL SFEDESGRVW WFRYSYWTSS
101: QSYVLTKGWS RFVKEKKLDA GDVVLFERPR FGGRDHFYIG CRRQSPPPAH SMTVPDGPEP LSPTRRLRLF GVNFDCGPEP EPQPMTSASW FLPGNASSSQ
201: L

Best Arabidopsis Sequence Match ( AT2G36080.1 )
(BLAST)

001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS

Arabidopsis Description

ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.