CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03299	Soybean	cytosol	34.25	62.66
KRH63534	Soybean	nucleus	61.23	61.57
KRH54405	Soybean	cytosol	62.33	60.42
VIT_17s0000g08260.t01	Wine grape	cytosol	60.14	59.49
Solyc03g114320.2.1	Tomato	cytosol	59.04	59.04
PGSC0003DMT400062960	Potato	cytosol	58.36	58.36
GSMUA_Achr10P...	Banana	cytosol	52.74	58.33
KRH60081	Soybean	nucleus	44.66	57.9
KRH41360	Soybean	nucleus	45.48	57.44
KRH06445	Soybean	cytosol	42.74	56.32
AT1G27500.2	Thale cress	cytosol	50.0	55.22
Bra032832.1-P	Field mustard	nucleus	49.45	54.78
CDY27619	Canola	nucleus	49.45	54.78
EES05647	Sorghum	cytosol	53.15	54.42
Zm00001d051589_P001	Maize	cytosol	53.01	54.28
Os02t0708400-01	Rice	plasma membrane	52.74	54.15
HORVU6Hr1G069310.1	Barley	cytosol	51.51	53.11
GSMUA_Achr2P09630_001	Banana	nucleus	51.92	53.01
KRG93305	Soybean	cytosol	50.82	53.0
TraesCS6B01G302000.1	Wheat	cytosol	51.51	52.96
TraesCS6D01G254800.1	Wheat	cytosol	51.51	52.96
TraesCS6A01G274500.1	Wheat	cytosol	51.37	52.89
Zm00001d017793_P001	Maize	cytosol	51.64	52.88
CDX90092	Canola	cytosol, mitochondrion	9.04	52.8
KRH56614	Soybean	cytosol	50.41	52.42
CDY56191	Canola	cytosol	50.68	51.97
KRH19545	Soybean	mitochondrion	18.08	21.43
KRH32172	Soybean	mitochondrion	17.95	21.3

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100813461	MapMan:21.1.1.4.3	EMBL:ACUP02002809	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G037300
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:K7KMQ3	EnsemblPlants:KRH57064	ProteinID:KRH57064	ProteinID:KRH57064.1	PFAM:PF13181	PFAM:PF13424
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF156	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002339E30	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:3299913..3303696

Molecular Weight (calculated)

80646.2 Da

IEP (calculated)

6.924

GRAVY (calculated)

-0.442

Length

730 amino acids

Sequence
(BLAST)

001: MPEIVTNGVN DERRVNEMNE IGNISPLRET PSPIKNLRSS LSPQRRQSVG PNFPVNRVID TSSIDRLHGN VCDKQSSSQS PSRQSFGSDG NESKTDSELH
101: NLVKEGVKKK TKGDSRSEAS SKMGSLSNDK KLDRIRPATA SGVVSQKLKK ASQSQLALEF PSRSRPKGKS PPPKPPVDRK NDNNPLGKQN TRVIRVKKTV
201: GGRSLSQSHI ENFTGSALDR PDLGLALLNQ ARNMISSGDN PMKALELSLQ AMKLFERAAA YGKPSLDLAM CLHVTAAIYC SLGHFSEAIP IIERSIEIPT
301: IEEDHQHAIA KFAGHMHLGD IYAMLGHLEK SIKCYTEGLK VQRKALGETD PKVGETCRYV AEANFQALQF DEAERLCQIA LDIHRANGSP SSLEEAADRR
401: LMGLICEANG KHEAALEHLV LASMAMVANG QHVEVASVDC NIGDTYLSLA RYDEAIFAYQ RALAVYRTHK GENHPSVGSV FVRLADLYCR TWKIRESKSY
501: CESALKIYEN PMPGVPPEEV ASGFMNVSAI YESMNELEQA LKLLHKALEI LNEASGQQNT IAGIEAQMGV MYYVLENYTE SYNTFKNAVS KLRATGEKKS
601: AFFGTVLNQM GLACVQLHAL DEAVELFEEA RVILEQENGP YHPETLGVYG NLAGTYDAIG RLDEAIEILE NIVVMREEKL GTANPDVVDE KRRLDELLKE
701: TGRVRNRKTK SLEILFDANP RTIKNLVVEA

Best Arabidopsis Sequence Match ( AT1G27500.2 )
(BLAST)

001: MKDSCLFEIK KMEGGSVNES HSNADQMFDT TIEELCKNLC ELQSSNQSPS RQSFGSYGDE SKIDSDLQHL ALGEMRDIDI LEDEGDEDEV AKPEEFDVKS
101: NSSNLDLEVM PRDMEKQTGK KNVTKSNVGV GGMRKKKVGG TKLQNGNEEP SSENVELARF LLNQARNLVS SGDSTHKALE LTHRAAKLFE ASAENGKPCL
201: EWIMCLHVTA AVHCKLKEYN EAIPVLQRSV EIPVVEEGEE HALAKFAGLM QLGDTYAMVG QLESSISCYT EGLNIQKKVL GENDPRVGET CRYLAEALVQ
301: ALRFDEAQQV CETALSIHRE SGLPGSIAEA ADRRLMGLIC ETKGDHENAL EHLVLASMAM AANGQESEVA FVDTSIGDSY LSLSRFDEAI CAYQKSLTAL
401: KTAKGENHPA VGSVYIRLAD LYNRTGKVRE AKSYCENALR IYESHNLEIS PEEIASGLTD ISVICESMNE VEQAITLLQK ALKIYADSPG QKIMIAGIEA
501: QMGVLYYMMG KYMESYNTFK SAISKLRATG KKQSTFFGIA LNQMGLACIQ LDAIEEAVEL FEEAKCILEQ ECGPYHPETL GLYSNLAGAY DAIGRLDDAI
601: KLLGHVVGVR EEKLGTANPV TEDEKRRLAQ LLKEAGNVTG RKAKSLKTLI DSDLTSSSAL R

Arabidopsis Description

Tetratricopeptide repeat (TPR)-like superfamily protein [Source:TAIR;Acc:AT1G27500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.