Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051589_P001 | Maize | cytosol | 96.63 | 96.63 |
| Zm00001d017793_P001 | Maize | cytosol | 94.39 | 94.39 |
| Os02t0708400-01 | Rice | plasma membrane | 91.16 | 91.42 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 89.62 | 90.13 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 89.48 | 90.11 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 89.62 | 90.0 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 89.06 | 89.44 |
| GSMUA_Achr10P... | Banana | cytosol | 70.97 | 76.67 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 69.28 | 69.09 |
| VIT_17s0000g08260.t01 | Wine grape | cytosol | 68.44 | 66.12 |
| Solyc03g114320.2.1 | Tomato | cytosol | 65.92 | 64.38 |
| PGSC0003DMT400062960 | Potato | cytosol | 65.92 | 64.38 |
| VIT_14s0066g01280.t01 | Wine grape | cytosol | 58.91 | 62.69 |
| KRH63534 | Soybean | nucleus | 62.97 | 61.85 |
| KRH56614 | Soybean | cytosol | 60.17 | 61.11 |
| KRG93305 | Soybean | cytosol | 59.47 | 60.57 |
| CDY58518 | Canola | cytosol | 54.7 | 59.36 |
| CDX86457 | Canola | cytosol | 55.12 | 59.19 |
| Bra025315.1-P | Field mustard | cytosol | 55.12 | 59.19 |
| AT3G27960.1 | Thale cress | cytosol | 54.84 | 58.97 |
| KRH54405 | Soybean | cytosol | 61.71 | 58.43 |
| PGSC0003DMT400001405 | Potato | cytosol | 57.5 | 57.26 |
| Solyc02g086840.2.1 | Tomato | cytosol | 56.8 | 56.96 |
| AT1G27500.2 | Thale cress | cytosol | 52.45 | 56.58 |
| CDY27619 | Canola | nucleus | 51.33 | 55.54 |
| Bra032832.1-P | Field mustard | nucleus | 51.33 | 55.54 |
| CDX90092 | Canola | cytosol, mitochondrion | 9.54 | 54.4 |
| EES06120 | Sorghum | plastid | 46.56 | 54.25 |
| KRH57064 | Soybean | cytosol | 54.42 | 53.15 |
| CDY56191 | Canola | cytosol | 52.73 | 52.81 |
| KRH03299 | Soybean | cytosol | 27.07 | 48.37 |
| EES07769 | Sorghum | mitochondrion | 19.21 | 22.24 |
| EER95495 | Sorghum | mitochondrion | 16.55 | 20.63 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | EntrezGene:8073151 | UniProt:C5Y099 | ncoils:Coil | EnsemblPlants:EES05647 |
| ProteinID:EES05647 | ProteinID:EES05647.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13176 | PFAM:PF13181 | PFAM:PF13424 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | SMART:SM00028 | EnsemblPlantsGene:SORBI_3004G265600 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0001A85D7E | RefSeq:XP_002452671.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:61021666..61025531
Molecular Weight (calculated)
77422.2 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.445
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGITVDGVV AEEVPNGVNS SPQNENIPAP KSTAASTMAA SMHSEALEMH VEGSGAGEPS IEQLYNNVCE MESSSEGGSP SRESFGSDGE ESRIDSELRH
101: LVAGEMEAMK VIEEEEENGS VANVLPPPPA ENGTPVKEQS SNSSKKSKKA SKSQLESDAS VGPNGKVSTE EGESEVSKPA SRVGHRRKSN AKPQNGTEDA
201: GLDNPDLGPF LLKHARDLIA SENPRRALKY ALRATKSFEK CAGGKPSLNL VMSLHVVAAI YCNLGKYEEA VPVLQRSLEI PVIEEGQEHA LAKFSGCMQL
301: GDTYGMLGQT ALSLQWYASG LEIQKQTLGE QDPRVGETCR YLAEAHVQAL QLDEAQRLCQ IALDIHREHG ETASLEETAD RRLMGLICDT KGDHEAALEH
401: LVMASMAMVA NGQETEVASV DCSIGDIYLS LGRYDEAVFA YQKALTVFKT SKGENHATVA SVFVRLADLY NKTGKLRESK SYCENALKIY QKPIPGTSLE
501: EIATGLTDVS AIYETMNEHE QALKLLQKAL KMYNNSAGQQ STIAGIEAQM GVLHYILGNY GESYDSFKSA IAKLRTCGEK KSAFFGIALN QMGLACVQRY
601: SINEAAELFE EARTVLEQEY GPYHPDTLGV YSNLAGTYDA MGRLDEAIEI LEYVVGMREE KLGTANPDVD DEKRRLGELL KEAGRVRSRK AKSLENLLET
701: NPYTATKRNA IVA
101: LVAGEMEAMK VIEEEEENGS VANVLPPPPA ENGTPVKEQS SNSSKKSKKA SKSQLESDAS VGPNGKVSTE EGESEVSKPA SRVGHRRKSN AKPQNGTEDA
201: GLDNPDLGPF LLKHARDLIA SENPRRALKY ALRATKSFEK CAGGKPSLNL VMSLHVVAAI YCNLGKYEEA VPVLQRSLEI PVIEEGQEHA LAKFSGCMQL
301: GDTYGMLGQT ALSLQWYASG LEIQKQTLGE QDPRVGETCR YLAEAHVQAL QLDEAQRLCQ IALDIHREHG ETASLEETAD RRLMGLICDT KGDHEAALEH
401: LVMASMAMVA NGQETEVASV DCSIGDIYLS LGRYDEAVFA YQKALTVFKT SKGENHATVA SVFVRLADLY NKTGKLRESK SYCENALKIY QKPIPGTSLE
501: EIATGLTDVS AIYETMNEHE QALKLLQKAL KMYNNSAGQQ STIAGIEAQM GVLHYILGNY GESYDSFKSA IAKLRTCGEK KSAFFGIALN QMGLACVQRY
601: SINEAAELFE EARTVLEQEY GPYHPDTLGV YSNLAGTYDA MGRLDEAIEI LEYVVGMREE KLGTANPDVD DEKRRLGELL KEAGRVRSRK AKSLENLLET
701: NPYTATKRNA IVA
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.