CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0699700-01	Rice	cytosol	28.78	76.2
Zm00001d036484_P001	Maize	mitochondrion	80.66	73.78
PGSC0003DMT400025330	Potato	cytosol	20.82	72.62
TraesCS7D01G414300.2	Wheat	plastid	70.99	69.64
TraesCS7A01G422100.3	Wheat	plastid	70.99	69.41
TraesCS7B01G322500.4	Wheat	plastid	70.53	69.2
HORVU7Hr1G097570.14	Barley	plastid	70.08	67.62
VIT_13s0019g04170.t01	Wine grape	cytosol	54.49	57.16
GSMUA_Achr3P05610_001	Banana	mitochondrion	54.27	55.53
CDY31739	Canola	cytosol	52.45	51.28
KRH34882	Soybean	plastid	54.04	51.24
CDX77216	Canola	cytosol	51.65	51.13
Solyc04g049360.2.1	Tomato	plastid	52.22	50.89
CDY47888	Canola	cytosol	52.33	50.77
Bra035662.1-P	Field mustard	cytosol	51.65	50.5
AT2G28880.1	Thale cress	plastid	52.45	50.16
VIT_13s0019g04180.t01	Wine grape	cytosol	50.97	50.0
KRG91886	Soybean	mitochondrion	51.88	49.24
Bra011921.1-P	Field mustard	cytosol, plastid	52.33	49.09
CDY65211	Canola	plastid	51.54	48.24
KXG37227	Sorghum	mitochondrion, plastid	16.61	25.3
KXG39728	Sorghum	plastid	16.04	23.34

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	KEGG:00790+2.6.1.85	Gene3D:3.60.120.10	MapMan:7.5.1.1	UniProt:A0A194YL99
InterPro:ADC_synthase	InterPro:Anth_synth_I_N	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	InterPro:GATASE	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006541
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009396	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	GO:GO:0046417	GO:GO:0046820	InterPro:IPR005801	InterPro:IPR017926
InterPro:IPR029062	EnsemblPlants:KXG20764	ProteinID:KXG20764	ProteinID:KXG20764.1	PFAM:PF00117	PFAM:PF00425
PFAM:PF04715	PRINTS:PR00096	PRINTS:PR00097	PRINTS:PR00099	PFscan:PS51273	PANTHER:PTHR11236
PANTHER:PTHR11236:SF18	MetaCyc:PWY-5958	MetaCyc:PWY-6543	MetaCyc:PWY-6660	MetaCyc:PWY-6661	InterPro:Para-NH2Bz_synth_comp_1
EnsemblPlantsGene:SORBI_3010G250200	SUPFAM:SSF52317	SUPFAM:SSF56322	TIGRFAMs:TIGR00553	UniParc:UPI0003C68A43	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:58938352..58944377

Molecular Weight (calculated)

97278.4 Da

IEP (calculated)

7.228

GRAVY (calculated)

-0.317

Length

879 amino acids

Sequence
(BLAST)

001: MAALRLPAQP AARLSHLPTP VSASAAARRV SPPRHLVVRR AKGEDTPEPP VRTLLIDNYD SYTYNIFQEL SVVNGVPPVV VRNDEWTWRD VFNRVYKDRA
101: FDNIVISPGP GSPACPADIG VCLRILLECG DVPILGVCLG HQALGFVHGA KIVHAPEAIH GRLSEIEHDG SYLFNCVPSG RNSGFKVVRY HSLVIESGSL
201: PDDLSSIAWT ASRNLLSYLE SDRSNVGTFL GSLDNNFITN PLEYNNNSGE LSNIGHASES DDGRVIMGIR HSSRPHFGVQ FHPESVATHH GRQIFRNFKK
301: MTGDFGLCSS WLQERKVNSA RHRDSIPKDL LRTKRMELSE PVGSCVLGKR GTGKKCLRLR WKKIENFLCP TVGSEDIFAV LFGHQSGEDT FWLDSSSVDQ
401: NRARFSFMGG KGGSLWKQMT FHLSGQRANC GGTLITQDAY GYTAKNFIKE GFLEFLNKEI ESIQYNEKDY EGLPFEFHGG FVGYLGYGLK VECDASSNNA
501: KSSTPDACFV FADNTVVVDH SNGDVYILSL HDEFYSSNGD GICKNSTHTS WLVETEKKLL RLGGMPPGSP INGKAYARSS SVHKQSFVVE KSKDQYIREV
601: QSCLDYIRDG ESYELCLTTQ MKRRVDYINA LQLYLKLRKQ NPAPYAAWLN FSSENLSICC SSPERFLRLD RGGVLEAKPI KGTIARGRTP EEDECLRLQL
701: KYSEKDQAEN LMIVDLLRND LGKVCEPGSV HVPCLMDVES YKTVHTMVST VRGTKKSNLS PVDCVKAAFP GGSMTGAPKV RSMEILDSLE TSPRGVYSGS
801: IGFFSYNHTF DLNIVIRTVV LHDGEASVGA GGAIVALSNP EAEYNEMLLK AKAPTKVVED FIQTVYSSDR SDSMQTTLS

Best Arabidopsis Sequence Match ( AT2G28880.1 )
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Arabidopsis Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.