Factsheet for Zm00001d036484_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20764	Sorghum	mitochondrion	73.78	80.66
Os06t0699700-01	Rice	cytosol	27.16	78.61
PGSC0003DMT400025330	Potato	cytosol	18.63	71.03
TraesCS7D01G414300.2	Wheat	plastid	63.16	67.75
TraesCS7B01G322500.4	Wheat	plastid	63.16	67.75
TraesCS7A01G422100.3	Wheat	plastid	63.06	67.41
HORVU7Hr1G097570.14	Barley	plastid	63.16	66.63
VIT_13s0019g04170.t01	Wine grape	cytosol	49.64	56.92
GSMUA_Achr3P05610_001	Banana	mitochondrion	49.53	55.41
KRH34882	Soybean	plastid	49.32	51.13
Solyc04g049360.2.1	Tomato	plastid	47.87	51.0
CDY31739	Canola	cytosol	47.66	50.95
AT2G28880.1	Thale cress	plastid	48.7	50.92
CDX77216	Canola	cytosol	46.93	50.79
VIT_13s0019g04180.t01	Wine grape	cytosol	47.14	50.56
Bra035662.1-P	Field mustard	cytosol	47.14	50.39
CDY47888	Canola	cytosol	47.45	50.33
KRG91886	Soybean	mitochondrion	47.55	49.35
Bra011921.1-P	Field mustard	cytosol, plastid	47.45	48.67
CDY65211	Canola	plastid	47.14	48.24
Zm00001d012925_P001	Maize	plastid	15.4	25.61
Zm00001d034713_P002	Maize	plastid	14.88	23.52
Zm00001d028536_P001	Maize	plastid	14.26	22.68

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:7.5.1.1	UniProt:A0A1D6LNP0	InterPro:ADC_synthase
ProteinID:AQK81154.1	InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	InterPro:GATASE
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	GO:GO:0046417	GO:GO:0046820	InterPro:IPR005801	InterPro:IPR017926
InterPro:IPR029062	PFAM:PF00117	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PFscan:PS51273
PANTHER:PTHR11236	PANTHER:PTHR11236:SF18	SUPFAM:SSF52317	SUPFAM:SSF56322	UniParc:UPI000844721E	EnsemblPlantsGene:Zm00001d036484
EnsemblPlants:Zm00001d036484_P001	EnsemblPlants:Zm00001d036484_T001	SEG:seg	:	:	:

Description

Aminodeoxychorismate synthase chloroplastic

Coordinates

chr6:-:90182314..90188051

Molecular Weight (calculated)

106338.0 Da

IEP (calculated)

7.408

GRAVY (calculated)

-0.275

Length

961 amino acids

Sequence
(BLAST)

001: MAALRLPAQP VARWPHLPSA YAAAAAARRV SAPRGHLAAR RAKGEEPPEP PVRTLLIDNY DSYTYNIFQE LSVVNGVPPV VVRNDEWTWG DIFNRLYKDR
101: TFDNIVISPG PGSPACPADI GGSSVLPCFA KPGFVHSLFR INYLVHAFLS GVCLRILLEC GDIPILGVCL GHQALGFVHG AEIVHAPEAI HGRLRQGLEF
201: IEIEHDGCHL FNRVPSGRNS GFKVVRYHSL VIESGSLPDD LTSIAWTASP NLLSYLESDR TNVSTFLGTL DNNLMRNPLE YSNNGGELSN IGHACESDDS
301: RVIMGIRHSS RPHYGVQFHP ESIATHHGRQ IFRNFKKITG NFGLRSSWIQ ERKVHSIGKL EKSQVNSASH HDSIPKDLLH TERMELSESV LGKRGIGKKC
401: LRLQWKKIEN FVCPTVGSED IFAVLFGHQS GEDTFWLDSS SVDQNRARFS FMGGKGGSLW KQMSFHLSGQ RANCGGMLSI QDAYGFTAKK FIKDGFLEFL
501: NKEIESIQYN EKDYEGLPFE FHGGFVGYLG YGLKVECDAS SNKAKSSTPD ACFVFADNTV VVDHSNGDVY ILSLHDEFYS SNGDGICKNS THTSWLVETE
601: KKLLRLGGMP SGSPIIRKTH ARSSSVHKQA GSPINGKTYV RSSSALKQSF VVEKSKDQYV RDVQNCLDYI RDGESYELCL TTQMKRRADC INALQLYLKL
701: RKQNPAPYAA WLNFSSENLS ICCSSPERFL RLDRAGVLEA KPIKGTIARG RTPEEDECLR LQLRYRQRSY ATAIFSLLHV LNSTSEKDQA ENLMIVDLLR
801: NDLGKVCEPG SVHVPRLMDV ESYRSVHTMV STVCGTKKPD LSPVDCVKAA FPGGSMTGAP KVRSMEILDS LETSPRGVYS GSIGFFSYNH TFDLNIVIRT
901: VILHDGEASV GAGGAIVALS SPEAEYDEML LKAKAPTEVV EDLVQTIYSS DRSDSMQTTI S

Best Arabidopsis Sequence Match ( AT2G28880.1 )
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Arabidopsis Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.