CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91886	Soybean	mitochondrion	89.86	89.96
PGSC0003DMT400025330	Potato	cytosol	20.82	76.59
VIT_13s0019g04170.t01	Wine grape	cytosol	58.14	64.32
Os06t0699700-01	Rice	cytosol	22.65	63.25
Solyc04g049360.2.1	Tomato	plastid	57.5	59.09
VIT_13s0019g04180.t01	Wine grape	cytosol	55.77	57.7
GSMUA_Achr3P05610_001	Banana	mitochondrion	52.21	56.34
AT2G28880.1	Thale cress	plastid	55.23	55.71
CDY31739	Canola	cytosol	53.51	55.17
CDX77216	Canola	cytosol	52.64	54.95
CDY47888	Canola	cytosol	53.51	54.75
Bra035662.1-P	Field mustard	cytosol	52.86	54.51
KXG20764	Sorghum	mitochondrion	51.24	54.04
CDY65211	Canola	plastid	54.05	53.35
Bra011921.1-P	Field mustard	cytosol, plastid	53.83	53.26
TraesCS7B01G322500.4	Wheat	plastid	50.38	52.12
TraesCS7A01G422100.3	Wheat	plastid	50.27	51.84
TraesCS7D01G414300.2	Wheat	plastid	49.95	51.67
HORVU7Hr1G097570.14	Barley	plastid	50.59	51.48
Zm00001d036484_P001	Maize	mitochondrion	51.13	49.32
KRH36143	Soybean	plastid	10.57	25.99
KRG90616	Soybean	nucleus, plastid	15.21	24.87
KRG97759	Soybean	plastid	15.21	23.94
KRG97758	Soybean	plastid	14.02	23.59

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	KEGG:00790+2.6.1.85	EntrezGene:100804116	Gene3D:3.60.120.10	MapMan:7.5.1.1
EMBL:ACUP02006641	InterPro:ADC_synthase	InterPro:Anth_synth_I_N	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	ncoils:Coil
InterPro:GATASE	EnsemblPlantsGene:GLYMA_10G211600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009396	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0046654
GO:GO:0046820	InterPro:IPR005801	InterPro:IPR017926	InterPro:IPR029062	UniProt:K7LKM5	EnsemblPlants:KRH34882
ProteinID:KRH34882	ProteinID:KRH34882.1	ProteinID:KRH34883.1	PFAM:PF00117	PFAM:PF00425	PFAM:PF04715
PRINTS:PR00096	PRINTS:PR00097	PRINTS:PR00099	PFscan:PS51273	PANTHER:PTHR11236	PANTHER:PTHR11236:SF18
MetaCyc:PWY-5958	MetaCyc:PWY-6543	MetaCyc:PWY-6660	MetaCyc:PWY-6661	InterPro:Para-NH2Bz_synth_comp_1	SUPFAM:SSF52317
SUPFAM:SSF56322	TIGRFAMs:TIGR00553	UniParc:UPI000233C4AF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:44413074..44422742

Molecular Weight (calculated)

104027.0 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.343

Length

927 amino acids

Sequence
(BLAST)

001: MNSSLRLFSS ELTCPASEST QNANVNFLLS RPSLRVSCFV KKGGDARVRV SNRDGRKTKA VVCCQLMHSH KEESDERKRR LQVVPVPVQK ADFVRTLLID
101: NYDSYTYNIF QELSIINGVP PVVIQNDDWT WEELCHYLYK ENAFDNIVIS PGPGSPACPE DIGICLQLLL KCWDIPILGV CLGHQALGYV HGAQVVHASE
201: PIHGRLSEVE HNGCQLFRDI PSGKNYGFKV VRYHSLVIDS ESLPAELIPI AWTSSTSTLP FIGSKDFGKS NTHEAQPDQS ISIDPLLAKV GNGSSNHFDY
301: GKTRSARVLM GIRHSTRPHY GVQFHPESVA TCYGSQIFKN FREITDDYWL RFRSSFKETH AYSDACMQVS SANRLYREVC RSISTENNAV DQLKEIVHAD
401: RHLEYNKAEM KHLEMFNMVN THHATTGYKC LKLKWRKFGH LAGQVGGAKG IFCGLFGLEA ENTFWLDSSS TEKGRARFSF MGGKGGSLWK QLVFRLSHQS
501: DGSSKGGGYL STEDSQGSAE TIFLEEGFLD FLNRELQSYR YDKNEYEGLP FDFHGGYIGY IGYNLKVECG VKSNRHKSKT PDACFFFADN LVAIDHKNDD
601: VYILAIHEES SSITQWLNDT EEKLLSLNGS VRMALERQKS LPLTFSSCKV GFAAEKSKEQ YIEDVKKCLN YIKDGESYEL CLTTQIRKSI EELNSLELYL
701: HLRERNPAPY AAWLNFSKVD LSICCSSPER FLQLDRKNIL EAKPIKGTIA RGATEEEDEQ LKFKLQFSEK DQAENLMIVD LLRNDLGRVC DPGSVHVPRL
801: MDVESYATVH TMVSTIRGKK RSDVSAVDCV KAAFPGGSMT GAPKLRSMEL LDSIESCSRG IYSGCIGFFS YNQAFDLNIV IRTVIVHEGE ASIGAGGAIV
901: ALSNPEDEYE EMVLKTKAPT RAVMHFA

Best Arabidopsis Sequence Match ( AT2G28880.1 )
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Arabidopsis Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.