CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97759	Soybean	plastid	92.74	86.76
KRG90616	Soybean	nucleus, plastid	70.05	68.08
PGSC0003DMT400084873	Potato	cytosol	9.8	67.5
KRH36143	Soybean	plastid	44.1	64.46
CDX70133	Canola	plastid	69.15	63.82
CDX98861	Canola	plastid	68.78	63.7
AT3G55870.3	Thale cress	plastid	68.24	63.62
Bra009130.1-P	Field mustard	plastid	68.6	63.32
CDY11333	Canola	plastid	68.24	63.3
Bra005864.1-P	Field mustard	plastid	67.88	62.96
CDX80970	Canola	plastid	67.88	62.96
GSMUA_Achr9P07690_001	Banana	mitochondrion	67.7	62.58
VIT_13s0067g00400.t01	Wine grape	plastid	64.79	61.87
AT5G05730.2	Thale cress	plastid	69.69	61.54
Os03t0826500-01	Rice	plastid	64.25	61.35
Zm00001d012925_P001	Maize	plastid	63.88	60.9
KXG37227	Sorghum	mitochondrion, plastid	63.7	60.83
TraesCS4A01G089800.1	Wheat	plastid	65.88	60.2
TraesCS4B01G214500.2	Wheat	plastid	65.52	60.17
TraesCS4D01G215100.1	Wheat	plastid	65.52	59.77
KXG39728	Sorghum	plastid	64.97	59.27
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	57.53	59.25
Os03t0264400-01	Rice	plastid	65.15	59.24
HORVU4Hr1G061120.2	Barley	plastid	65.34	59.11
Zm00001d028536_P001	Maize	plastid	64.61	58.94
Zm00001d034713_P002	Maize	plastid	64.61	58.55
TraesCS5D01G503800.1	Wheat	plastid	63.52	57.1
TraesCS5B01G502700.1	Wheat	plastid	63.34	57.03
Solyc06g005980.2.1	Tomato	plastid	57.71	54.64
PGSC0003DMT400069076	Potato	cytosol	10.89	49.18
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	51.18	45.93
KRH34882	Soybean	plastid	23.59	14.02
KRG91886	Soybean	mitochondrion	23.41	13.93

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	UniProt:A0A0R0F675	EMBL:ACUP02010814
InterPro:ADC_synthase	InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Chorismate_C	EnsemblPlantsGene:GLYMA_18G028800	GO:GO:0000162
GO:GO:0003674	GO:GO:0003824	GO:GO:0004049	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005801	EnsemblPlants:KRG97758	ProteinID:KRG97758	ProteinID:KRG97758.1	PFAM:PF00425	PFAM:PF04715
PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	MetaCyc:PWY-5958	MetaCyc:PWY-6660	MetaCyc:PWY-6661
SUPFAM:SSF56322	UniParc:UPI0006ED7F42	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:2170280..2175440

Molecular Weight (calculated)

60918.0 Da

IEP (calculated)

6.680

GRAVY (calculated)

-0.249

Length

551 amino acids

Sequence
(BLAST)

001: MLSATLPMSL TSAKAFSSRM VPFGHRLSPA TLTGVSLSRS PLTLRCSPLS STPSYVEEGA KFVEASKNGN LIPLCQCIFS DQLTPILAYR ILVKEDDRES
101: PSFLFESAEP SYHASSVGRY SVVGAQPTME VVAKENKVTI IDHESGNLTE KIVDDPMMIP RKVSEGWKPY LINELPDAFC GGWAGYFSYD TVRYVEKKKL
201: PFSNAPEDDR NLADIHLGLY ENVIVFDHVE KKAYVILWVR VDRYSSAESA YKDGMERLEK LVAKLQDGQP PRLAPGSVDL HTHHFGPSLK KSSMTSEAYK
301: EAVLQAKEHI KAGDIFQIAR GCILVASSPE ILTRIKKNKI VNRPLAGTAK RGKTPEEDAR LEAILLRDEK QCAEHVMLVD LGRNDVGKVA KSGSVKVEKL
401: MNIERYSHVM HISSTVTGEL QDHLTSWDAL RAALPVGTVS GAPKVKAMEL IDELEVKRRG PYSGGFGYIS FLGEMDIALA LRTMVFPTGT RYDTMYSYKD
501: VDQRHEWIAY LQAGAGIVAD SVPDDEHQEC QNKAAGLARA IDLAEAAFVD K

Best Arabidopsis Sequence Match ( AT3G55870.3 )
(BLAST)

001: MQALGVIQSP GIRISLSPSS HRLSQPSLVT GISKRNSSSI SLSIKCGSIL SCPSLSSEAM KFAEGSKKEN LVPLRHTIFS DHLTPVLAYR CLVKEDDQEA
101: PSFLFESVEP GHHSSTVGRY SVVGAHPKME IVAKENKVTV MDHVKGTKTT EEVEDPMMIP RRISETWKPQ LIDDLPDVFC GGWVGYFSYD TVPYAEKRKL
201: PLSKAPVDDR NLPDMHLGLY DDVVVFDHVE KKIHIIHWVR LSENSSFDDV YANAVKHLEE LVSRIKCMNP PKLPYGSVDL HTNQFGTPLE KSSMTSDAYK
301: NAVLQAKEHI LAGDIFQIVL SQRFERHTFA HPFEVYRALR IVNPSPSMCY LQARGCILVA SSPEILTRVK KNKIVNRPLA GTARRGKSFE EDQMLEEALL
401: KDEKQCAEHI MLVDLGRNDV GKVSKNGSVK VERLMNIERY SHVMHISSTV IGELQENLTC WDTLRAALPV GTVSGAPKVK AMELIDELEV TRRGPYSGGF
501: GSVSFTGDMD IALALRTIVF PTQARYDTMY SYKDKDTPRR EWIAYLQAGA GIVADSDPED EHRECQNKAA GLARAIDLAE SAFVDKSDTT I

Arabidopsis Description

ADC synthase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMN9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.