CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034713_P002	Maize	plastid	93.76	88.98
Os03t0826500-01	Rice	plastid	84.58	84.58
TraesCS5D01G503800.1	Wheat	plastid	82.15	77.32
TraesCS5B01G502700.1	Wheat	plastid	81.63	76.96
PGSC0003DMT400084873	Potato	cytosol	9.88	71.25
Solyc06g006100.2.1	Tomato	plastid	71.75	70.53
PGSC0003DMT400010634	Potato	cytosol	71.58	70.36
KRG90616	Soybean	nucleus, plastid	68.8	70.02
KRH36143	Soybean	plastid	45.41	69.5
VIT_06s0004g06320.t01	Wine grape	plastid	70.19	66.61
Bra009130.1-P	Field mustard	plastid	67.76	65.49
Bra005864.1-P	Field mustard	plastid	67.24	65.32
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	69.15	64.98
AT3G55870.3	Thale cress	plastid	66.38	64.81
KRG97759	Soybean	plastid	65.68	64.35
KXG39728	Sorghum	plastid	67.24	64.24
KRG97758	Soybean	plastid	60.83	63.7
AT2G29690.1	Thale cress	plastid	67.76	62.96
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	58.23	62.8
AT5G05730.2	Thale cress	plastid	66.72	61.7
VIT_13s0067g00400.t01	Wine grape	plastid	61.35	61.35
CDY47655	Canola	cytosol	9.36	60.0
Solyc06g005980.2.1	Tomato	plastid	57.19	56.7
PGSC0003DMT400069076	Potato	cytosol	10.75	50.82
Bra000473.1-P	Field mustard	plastid	67.07	34.22
KXG20764	Sorghum	mitochondrion	25.3	16.61

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	UniProt:A0A1B6QH50	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	InterPro:Chorismate_C	GO:GO:0000162	GO:GO:0003674
GO:GO:0003824	GO:GO:0004049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005801	EnsemblPlants:KXG37227	ProteinID:KXG37227	ProteinID:KXG37227.1	PFAM:PF00425	PFAM:PF04715
PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	MetaCyc:PWY-5958	MetaCyc:PWY-6660	MetaCyc:PWY-6661
EnsemblPlantsGene:SORBI_3001G029300	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniParc:UPI0003C71A56	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:2279889..2285371

Molecular Weight (calculated)

64386.4 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.224

Length

577 amino acids

Sequence
(BLAST)

001: MATTSLALSL RLTPSSRPLS LRRRGAAVVT CRATTATFHQ LDAVAVREEE SKFRMAAAEG CNLLPLTRCI FSDHLTPVLA YRCLVKEDDR EAPSFLFESV
101: EQGSEGTNVG RYSVVGAQPA MEIVAKANHV TVMDHEMKSR REHFVPDPMK IPRTIMEQWN PQIADGLPNA FCGGWVGFFS YDTVRYVETK KLPFSKAPLD
201: DRNLPDIHLG LYSDVIVFDH VEKKTHVIHW VRTDCYNSID EAYEDGTTRL EALLSRLHCL NIPMLSSGSI KLNVGNTGSV MQNSTMSREE YKNIVVQAKE
301: HILAGDIFQV VLSQRFERRT FADPFEIYRA LRIVNPSPYM AYLQARGCIL VASSPEILTR VQKRTVVNRP LAGTIRRGKT KAEDKVLEQL LLSDEKQRAE
401: HIMLIDLGRN DVGKVSKPGS VKVEKLMNIE RYSHVMHISS TVTGELRDDL TCWDALRAAL PVGTVSGAPK VRAMELIDQL EVNMRGPYSG GFGGISFCGD
501: MDIALALRTI VFPTTSRFDT MYSYTDKKSR QEWVAHLQAG AGIVADSKPD DEHQECLNKA AGAARAIDLA ESTFLEE

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.