Factsheet for PGSC0003DMT400069076

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	71.31	16.26
Solyc06g005980.2.1	Tomato	plastid	70.49	14.78
PGSC0003DMT400010634	Potato	cytosol	52.46	10.9
KRG97758	Soybean	plastid	49.18	10.89
KXG37227	Sorghum	mitochondrion, plastid	50.82	10.75
GSMUA_Achr9P07690_001	Banana	mitochondrion	52.46	10.74
Os03t0826500-01	Rice	plastid	50.0	10.57
TraesCS4B01G214500.2	Wheat	plastid	51.64	10.5
TraesCS4A01G089800.1	Wheat	plastid	51.64	10.45
TraesCS4D01G215100.1	Wheat	plastid	51.64	10.43
KRG97759	Soybean	plastid	50.0	10.36
Zm00001d028536_P001	Maize	plastid	50.82	10.26
KXG39728	Sorghum	plastid	50.82	10.26
Os03t0264400-01	Rice	plastid	50.82	10.23
Zm00001d034713_P002	Maize	plastid	50.82	10.2
HORVU4Hr1G061120.2	Barley	plastid	50.82	10.18
Zm00001d012925_P001	Maize	plastid	47.54	10.03
AT3G55870.3	Thale cress	plastid	48.36	9.98
TraesCS5D01G503800.1	Wheat	plastid	50.0	9.95
CDY11333	Canola	plastid	48.36	9.93
CDX80970	Canola	plastid	48.36	9.93
CDX98861	Canola	plastid	48.36	9.92
CDX70133	Canola	plastid	48.36	9.88
Bra009130.1-P	Field mustard	plastid	48.36	9.88
Bra005864.1-P	Field mustard	plastid	47.54	9.76
TraesCS5B01G502700.1	Wheat	plastid	48.36	9.64
AT5G05730.2	Thale cress	plastid	48.36	9.46
VIT_13s0067g00400.t01	Wine grape	plastid	43.44	9.19
PGSC0003DMT400025330	Potato	cytosol	18.03	8.73
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	8.2	1.63
PGSC0003DMT400084873	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400069076	EnsemblPlantsGene:PGSC0003DMG400026869	Gene3D:3.60.120.10	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
InterPro:ADC_synthase	InterPro:Chorismate_C	InterPro:IPR005801	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	PFAM:PF00425
PGSC:PGSC0003DMG400026869	SEG:seg	SUPFAM:SSF56322	TMHMM:TMhelix	UniParc:UPI0002952AE2	UniProt:M1CJW6
MapMan:35.1	:	:	:	:	:

Description

Feedback-insensitive anthranilate synthase alpha-2 chain [Source:PGSC_GENE;Acc:PGSC0003DMG400026869]

Coordinates

chr6:-:3661993..3662415

Molecular Weight (calculated)

13838.6 Da

IEP (calculated)

8.632

GRAVY (calculated)

-0.484

Length

122 amino acids

Sequence
(BLAST)

001: MELIDQLEVG RRVPYSGGFG GISFSGGMDI GLALRTLVFM NRPRYDTMYS YTDASKRQEW VAHLQSEARI VTDSDPDEKQ KECEDKVACL CRSSVLKINC
101: SVPNVFSRAR VHEKKKLTSQ MK

Best Arabidopsis Sequence Match ( AT2G29690.1 )
(BLAST)

001: MSAVSISAVK SDFFTVEAIA VTHHRTPHPP HFPSLRFPLS LKSPPATSLN LVAGSKLLHF SRRLPSIKCS YTPSLDLSEE QFTKFKKASE KGNLVPLFRC
101: VFSDHLTPIL AYRCLVKEDD RDAPSFLFES VEPGSQSSNI GRYSVVGAQP TIEIVAKGNV VTVMDHGASL RTEEEVDDPM MVPQKIMEEW NPQGIDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFSNAPE DDRSLPDVNL GLYDDVIVFD HVEKKAYVIH WVRIDKDRSV EENFREGMNR LESLTSRIQD QKPPKMPTGF
301: IKLRTQLFGP KLEKSTMTSE AYKEAVVEAK EHILAGDIFQ IVLSQRFERR TFADPFEIYR ALRIVNPSPY MAYLQVRGCI LVASSPEILL RSKNRKITNR
401: PLAGTVRRGK TPKEDLMLEK ELLSDEKQCA EHIMLVDLGR NDVGKVSKPG SVEVKKLKDI EWFSHVMHIS STVVGELLDH LTSWDALRAV LPVGTVSGAP
501: KVKAMELIDE LEVTRRGPYS GGFGGISFNG DMDIALALRT MVFPTNTRYD TLYSYKHPQR RREWIAHIQA GAGIVADSNP DDEHRECENK AAALARAIDL
601: AESSFLEAPE FTTITPHINN I

Arabidopsis Description

ASA2Anthranilate synthase alpha subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P32069]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.