CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009130.1-P	Field mustard	plastid	96.97	96.65
CDX70133	Canola	plastid	94.79	94.47
CDY11333	Canola	plastid	92.27	92.42
CDX80970	Canola	plastid	92.1	92.26
AT5G05730.2	Thale cress	plastid	90.92	86.7
PGSC0003DMT400084873	Potato	cytosol	9.41	70.0
KRG97759	Soybean	plastid	69.08	69.78
KRG97758	Soybean	plastid	63.7	68.78
VIT_13s0067g00400.t01	Wine grape	plastid	64.54	66.55
CDX83311	Canola	plastid	67.73	64.07
CDX95746	Canola	plastid	66.89	63.68
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	56.3	62.62
CDY47655	Canola	cytosol	8.4	55.56
Solyc06g005980.2.1	Tomato	plastid	54.29	55.5
PGSC0003DMT400069076	Potato	cytosol	9.92	48.36
CDY47888	Canola	cytosol	25.04	16.45
CDX77216	Canola	cytosol	24.2	16.22
CDY31739	Canola	cytosol	24.37	16.13
CDY65211	Canola	plastid	25.21	15.97
CDX83310	Canola	nucleus, plastid	12.1	14.17

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	GO:A0A078ECE9	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	EnsemblPlants:CDX98861	ProteinID:CDX98861	ProteinID:CDX98861.1
InterPro:Chorismate_C	ncoils:Coil	GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0004049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00106963001	InterPro:IPR005801
PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	MetaCyc:PWY-5958
MetaCyc:PWY-6660	MetaCyc:PWY-6661	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniPathway:UPA00035	UniParc:UPI0004EDAF2F
SEG:seg	:	:	:	:	:

Description

BnaC09g49740D

Coordinates

chrLK031907:-:321234..323901

Molecular Weight (calculated)

66099.7 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.336

Length

595 amino acids

Sequence
(BLAST)

001: MSSSSMNVAS MQPLSFSRRL APSAASHVLS SSVTVTGYSR RSSPYAPSLR SIKCVSAPPE ASIVTDTKKL ADASKSTNLI PIYSCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HKNGSMTEEY VEDPMEIPRK ISESWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVIVFDHVE KKAYVIHWIR LDGSVPYDKA YSNGVQHLET LVAKLHDIEP PKLAAGNVNL QTRQFGPALE
301: NSNVTREEYK EAVVNAKEHI LAGDIFQIVL SQRFEKRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSRRGKTEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVAKYGSVK VEKLMNIERY SHVMHISSTV TGELQDDLSC WDTLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTASQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPEDE HRECQNKAAG LARAIDLAES AFVKK

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.