Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95746 | Canola | plastid | 90.0 | 12.96 |
| CDX83311 | Canola | plastid | 85.56 | 12.24 |
| KXG37227 | Sorghum | mitochondrion, plastid | 60.0 | 9.36 |
| Zm00001d012925_P001 | Maize | plastid | 60.0 | 9.34 |
| Os03t0826500-01 | Rice | plastid | 58.89 | 9.19 |
| TraesCS5B01G502700.1 | Wheat | plastid | 61.11 | 8.99 |
| Zm00001d034713_P002 | Maize | plastid | 60.0 | 8.88 |
| TraesCS5D01G503800.1 | Wheat | plastid | 58.89 | 8.65 |
| CDX80970 | Canola | plastid | 55.56 | 8.42 |
| CDY11333 | Canola | plastid | 55.56 | 8.42 |
| CDX98861 | Canola | plastid | 55.56 | 8.4 |
| CDX70133 | Canola | plastid | 55.56 | 8.38 |
| CDY47888 | Canola | cytosol | 23.33 | 2.32 |
| CDX77216 | Canola | cytosol | 22.22 | 2.25 |
| CDY65211 | Canola | plastid | 23.33 | 2.24 |
| CDY31739 | Canola | cytosol | 20.0 | 2.0 |
| CDX83310 | Canola | nucleus, plastid | 10.0 | 1.77 |
| HORVU5Hr1G115160.1 | Barley | cytosol, mitochondrion, plastid | 1.11 | 0.16 |
Protein Annotations
| EnsemblPlants:CDY47655 | EnsemblPlantsGene:GSBRNA2T00087886001 | Gene3D:3.60.120.10 | GO:A0A078I9N3 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | InterPro:ADC_synthase | InterPro:IPR005801 | PANTHER:PTHR11236 | PANTHER:PTHR11236:SF33 | ProteinID:CDY47655 |
| ProteinID:CDY47655.1 | SEG:seg | SUPFAM:SSF56322 | UniParc:UPI0004EDDBA1 | UniProt:A0A078I9N3 | MapMan:35.1 |
Description
BnaC04g23920DBnaC04g23920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9N3]
Coordinates
chrLK032728:-:27824..28096
Molecular Weight (calculated)
10318.2 Da
IEP (calculated)
4.805
GRAVY (calculated)
-0.324
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MDIALALRTM VFPTITRYDT LYSYRHPQRR REWIAHIQAG AIFVADSNPD DEQRECENKA AALARAIDLA ESSFLEIPEV TTPRINNVLE
001: MSAVSISAVK SDFFTVEAIA VTHHRTPHPP HFPSLRFPLS LKSPPATSLN LVAGSKLLHF SRRLPSIKCS YTPSLDLSEE QFTKFKKASE KGNLVPLFRC
101: VFSDHLTPIL AYRCLVKEDD RDAPSFLFES VEPGSQSSNI GRYSVVGAQP TIEIVAKGNV VTVMDHGASL RTEEEVDDPM MVPQKIMEEW NPQGIDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFSNAPE DDRSLPDVNL GLYDDVIVFD HVEKKAYVIH WVRIDKDRSV EENFREGMNR LESLTSRIQD QKPPKMPTGF
301: IKLRTQLFGP KLEKSTMTSE AYKEAVVEAK EHILAGDIFQ IVLSQRFERR TFADPFEIYR ALRIVNPSPY MAYLQVRGCI LVASSPEILL RSKNRKITNR
401: PLAGTVRRGK TPKEDLMLEK ELLSDEKQCA EHIMLVDLGR NDVGKVSKPG SVEVKKLKDI EWFSHVMHIS STVVGELLDH LTSWDALRAV LPVGTVSGAP
501: KVKAMELIDE LEVTRRGPYS GGFGGISFNG DMDIALALRT MVFPTNTRYD TLYSYKHPQR RREWIAHIQA GAGIVADSNP DDEHRECENK AAALARAIDL
601: AESSFLEAPE FTTITPHINN I
101: VFSDHLTPIL AYRCLVKEDD RDAPSFLFES VEPGSQSSNI GRYSVVGAQP TIEIVAKGNV VTVMDHGASL RTEEEVDDPM MVPQKIMEEW NPQGIDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFSNAPE DDRSLPDVNL GLYDDVIVFD HVEKKAYVIH WVRIDKDRSV EENFREGMNR LESLTSRIQD QKPPKMPTGF
301: IKLRTQLFGP KLEKSTMTSE AYKEAVVEAK EHILAGDIFQ IVLSQRFERR TFADPFEIYR ALRIVNPSPY MAYLQVRGCI LVASSPEILL RSKNRKITNR
401: PLAGTVRRGK TPKEDLMLEK ELLSDEKQCA EHIMLVDLGR NDVGKVSKPG SVEVKKLKDI EWFSHVMHIS STVVGELLDH LTSWDALRAV LPVGTVSGAP
501: KVKAMELIDE LEVTRRGPYS GGFGGISFNG DMDIALALRT MVFPTNTRYD TLYSYKHPQR RREWIAHIQA GAGIVADSNP DDEHRECENK AAALARAIDL
601: AESSFLEAPE FTTITPHINN I
Arabidopsis Description
ASA2Anthranilate synthase alpha subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P32069]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.