Factsheet for Os03t0826500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37227	Sorghum	mitochondrion, plastid	84.58	84.58
Zm00001d012925_P001	Maize	plastid	81.8	81.66
TraesCS5D01G503800.1	Wheat	plastid	84.92	79.93
Zm00001d034713_P002	Maize	plastid	83.88	79.61
TraesCS5B01G502700.1	Wheat	plastid	83.71	78.92
KRH36143	Soybean	plastid	45.93	70.29
PGSC0003DMT400084873	Potato	cytosol	9.71	70.0
PGSC0003DMT400010634	Potato	cytosol	71.06	69.85
KRG90616	Soybean	nucleus, plastid	68.46	69.66
Solyc06g006100.2.1	Tomato	plastid	70.71	69.51
Bra005864.1-P	Field mustard	plastid	68.8	66.83
Bra009130.1-P	Field mustard	plastid	68.63	66.33
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	70.36	66.12
VIT_06s0004g06320.t01	Wine grape	plastid	69.67	66.12
AT3G55870.3	Thale cress	plastid	67.42	65.82
Os03t0264400-01	Rice	plastid	68.8	65.51
KRG97759	Soybean	plastid	66.38	65.03
KRG97758	Soybean	plastid	61.35	64.25
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	58.23	62.8
AT5G05730.2	Thale cress	plastid	67.76	62.66
AT2G29690.1	Thale cress	plastid	66.9	62.16
VIT_13s0067g00400.t01	Wine grape	plastid	62.05	62.05
CDY47655	Canola	cytosol	9.19	58.89
Solyc06g005980.2.1	Tomato	plastid	57.02	56.53
PGSC0003DMT400069076	Potato	cytosol	10.57	50.0
Os06t0699700-01	Rice	cytosol	20.1	34.94
Bra000473.1-P	Field mustard	plastid	65.86	33.6

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	EntrezGene:4334640	ProteinID:AAK82452.1
ProteinID:AAL79757.1	EMBL:AB022602	ProteinID:ABF99646.1	InterPro:ADC_synthase	InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N
InterPro:Anth_synth_I_PabB	ProteinID:BAF13678.1	ProteinID:BAS87160.1	InterPro:Chorismate_C	ProteinID:EAZ29134.1	GO:GO:0000162
GO:GO:0003674	GO:GO:0003824	GO:GO:0004049	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009073	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016829	InterPro:IPR005801
EnsemblPlantsGene:Os03g0826500	EnsemblPlants:Os03t0826500-01	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236
PANTHER:PTHR11236:SF33	UniProt:Q94GF1	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniParc:UPI00000A885B	RefSeq:XP_015628119.1
SEG:seg	:	:	:	:	:

Description

ANTHRANILATE SYNTHASE ALPHA-SUBUNIT 1Anthranilate synthase alpha 1 subunit. (Os03t0826500-01)

Coordinates

chr3:-:34715521..34721072

Molecular Weight (calculated)

63869.6 Da

IEP (calculated)

7.201

GRAVY (calculated)

-0.252

Length

577 amino acids

Sequence
(BLAST)

001: MASLVLSLRI APSTPPLGLG GGRFRGRRGA VACRAATFQQ LDAVAVREEE SKFKAGAAEG CNILPLKRCI FSDHLTPVLA YRCLVREDDR EAPSFLFESV
101: EQGSEGTNVG RYSVVGAQPA MEIVAKANHV TVMDHKMKSR REQFAPDPMK IPRSIMEQWN PQIVEGLPDA FCGGWVGFFS YDTVRYVETK KLPFSNAPED
201: DRNLPDIHLG LYNDIVVFDH VEKKTHVIHW VRVDCHESVD EAYEDGKNQL EALLSRLHSV NVPTLTAGSV KLNVGQFGSA LQKSSMSRED YKKAVVQAKE
301: HILAGDIFQV VLSQRFERRT FADPFEVYRA LRIVNPSPYM AYLQARGCIL VASSPEILTR VEKRTIVNRP LAGTIRRGKS KAEDKVLEQL LLSDGKQCAE
401: HIMLVDLGRN DVGKVSKPGS VKVEKLMNVE RYSHVMHISS TVTGELRDDL TCWDALRAAL PVGTVSGAPK VRAMELIDQM EGKMRGPYSG GFGGVSFRGD
501: MDIALALRTI VFPTGSRFDT MYSYTDKNAR QEWVAHLQAG AGIVADSKPD DEHQECLNKA AGLARAIDLA ESTFVDE

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.