CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97758	Soybean	plastid	86.76	92.74
KRG90616	Soybean	nucleus, plastid	70.8	73.55
KRH36143	Soybean	plastid	46.69	72.94
CDX98861	Canola	plastid	69.78	69.08
AT3G55870.3	Thale cress	plastid	69.27	69.04
CDX70133	Canola	plastid	69.78	68.84
PGSC0003DMT400084873	Potato	cytosol	9.34	68.75
CDY11333	Canola	plastid	69.27	68.69
Bra005864.1-P	Field mustard	plastid	68.93	68.35
CDX80970	Canola	plastid	68.93	68.35
Bra009130.1-P	Field mustard	plastid	69.1	68.17
GSMUA_Achr9P07690_001	Banana	mitochondrion	68.59	67.79
VIT_13s0067g00400.t01	Wine grape	plastid	65.2	66.55
Os03t0826500-01	Rice	plastid	65.03	66.38
AT5G05730.2	Thale cress	plastid	70.12	66.19
Zm00001d012925_P001	Maize	plastid	64.52	65.74
KXG37227	Sorghum	mitochondrion, plastid	64.35	65.68
TraesCS4A01G089800.1	Wheat	plastid	66.55	65.01
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	58.91	64.86
TraesCS4B01G214500.2	Wheat	plastid	66.04	64.83
TraesCS4D01G215100.1	Wheat	plastid	66.04	64.4
KXG39728	Sorghum	plastid	65.87	64.24
HORVU4Hr1G061120.2	Barley	plastid	66.38	64.2
Os03t0264400-01	Rice	plastid	65.87	64.03
Zm00001d028536_P001	Maize	plastid	65.36	63.74
Zm00001d034713_P002	Maize	plastid	65.36	63.32
TraesCS5B01G502700.1	Wheat	plastid	64.52	62.09
TraesCS5D01G503800.1	Wheat	plastid	64.35	61.83
Solyc06g005980.2.1	Tomato	plastid	58.91	59.62
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	52.8	50.65
PGSC0003DMT400069076	Potato	cytosol	10.36	50.0
KRH34882	Soybean	plastid	23.94	15.21
KRG91886	Soybean	mitochondrion	23.43	14.9

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	EntrezGene:100790900	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	EMBL:ACUP02010814
InterPro:ADC_synthase	InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	InterPro:Chorismate_C	EnsemblPlantsGene:GLYMA_18G028900
GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0004049	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR005801	UniProt:K7MPL4	EnsemblPlants:KRG97759	ProteinID:KRG97759	ProteinID:KRG97759.1
PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	MetaCyc:PWY-5958
MetaCyc:PWY-6660	MetaCyc:PWY-6661	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniParc:UPI000296E957	SEG:seg

Description

hypothetical protein

Coordinates

chr18:-:2179305..2184759

Molecular Weight (calculated)

65408.2 Da

IEP (calculated)

6.636

GRAVY (calculated)

-0.267

Length

589 amino acids

Sequence
(BLAST)

001: MLSATLPVSL TSAKGSSLAF SRRMVPSGHR LSPATLTGVS LSRAPLTLRC SSLSNTPSYV EEGRKFVEAS KNGNLIPLCQ SIFADQLTPV LAYRILVKED
101: DWEAPSFLLE SAEPSYHASS VGRYSVLGAN PTMEVVAKEN KVTIIDHESG NLTEEIVDDP MVIPRKISEG WKPYLIDELP DAFCGGWAGY FSYDTVRYVE
201: KKKLPFSNAP EDDRNLADIH LGLYENVIVF DHVEKKAYVI LWVRVDRYSS AESAYKDGME RLEKLVAKLQ DGQPPRLAPG SVDLHTHHFG PSLKKSSMTS
301: EAYKEAVLQA KEHIKAGDIF QIVLSQRFER RTFADPFEIY RALRVVNPSP YMAYLQARGC ILVASSPEIL TRVKKNKIMN RPLAGTARRG KTPEEDARFE
401: AILLRDEKQC AEHVMLVDLG RNDVGKVAKS GSVKVEKLMN VERYSHVMHI SSTVTGELQE HLTSWDALRA ALPVGTVSGA PKVKAMELID ELEVTRRGPY
501: SGGFGYISFS GEMDIALALR TMVFPSGTRY DTMYSYKDVD QRREWIAYLQ AGAGIVADSV PDDEHQECQN KAAGLARAID LAESAFVDK

Best Arabidopsis Sequence Match ( AT3G55870.3 )
(BLAST)

001: MQALGVIQSP GIRISLSPSS HRLSQPSLVT GISKRNSSSI SLSIKCGSIL SCPSLSSEAM KFAEGSKKEN LVPLRHTIFS DHLTPVLAYR CLVKEDDQEA
101: PSFLFESVEP GHHSSTVGRY SVVGAHPKME IVAKENKVTV MDHVKGTKTT EEVEDPMMIP RRISETWKPQ LIDDLPDVFC GGWVGYFSYD TVPYAEKRKL
201: PLSKAPVDDR NLPDMHLGLY DDVVVFDHVE KKIHIIHWVR LSENSSFDDV YANAVKHLEE LVSRIKCMNP PKLPYGSVDL HTNQFGTPLE KSSMTSDAYK
301: NAVLQAKEHI LAGDIFQIVL SQRFERHTFA HPFEVYRALR IVNPSPSMCY LQARGCILVA SSPEILTRVK KNKIVNRPLA GTARRGKSFE EDQMLEEALL
401: KDEKQCAEHI MLVDLGRNDV GKVSKNGSVK VERLMNIERY SHVMHISSTV IGELQENLTC WDTLRAALPV GTVSGAPKVK AMELIDELEV TRRGPYSGGF
501: GSVSFTGDMD IALALRTIVF PTQARYDTMY SYKDKDTPRR EWIAYLQAGA GIVADSDPED EHRECQNKAA GLARAIDLAE SAFVDKSDTT I

Arabidopsis Description

ADC synthase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMN9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.