Factsheet for PGSC0003DMT400051367

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g005980.2.1	Tomato	plastid	90.09	82.82
PGSC0003DMT400084873	Potato	cytosol	11.21	75.0
PGSC0003DMT400069076	Potato	cytosol	16.26	71.31
PGSC0003DMT400010634	Potato	cytosol	65.98	60.14
KRG97759	Soybean	plastid	64.86	58.91
GSMUA_Achr9P07690_001	Banana	mitochondrion	65.23	58.56
Os03t0826500-01	Rice	plastid	62.8	58.23
KXG37227	Sorghum	mitochondrion, plastid	62.8	58.23
KRG97758	Soybean	plastid	59.25	57.53
AT3G55870.3	Thale cress	plastid	62.99	57.02
Zm00001d012925_P001	Maize	plastid	61.12	56.57
CDY11333	Canola	plastid	62.62	56.4
CDX80970	Canola	plastid	62.62	56.4
CDX98861	Canola	plastid	62.62	56.3
Bra009130.1-P	Field mustard	plastid	62.8	56.28
VIT_13s0067g00400.t01	Wine grape	plastid	60.56	56.15
CDX70133	Canola	plastid	62.62	56.11
Bra005864.1-P	Field mustard	plastid	62.24	56.06
Zm00001d034713_P002	Maize	plastid	62.99	55.43
Zm00001d028536_P001	Maize	plastid	61.87	54.8
Os03t0264400-01	Rice	plastid	61.68	54.46
TraesCS5D01G503800.1	Wheat	plastid	62.24	54.32
KXG39728	Sorghum	plastid	61.31	54.3
TraesCS5B01G502700.1	Wheat	plastid	62.06	54.25
TraesCS4B01G214500.2	Wheat	plastid	60.19	53.67
TraesCS4D01G215100.1	Wheat	plastid	60.37	53.48
TraesCS4A01G089800.1	Wheat	plastid	60.19	53.4
AT5G05730.2	Thale cress	plastid	62.24	53.37
HORVU4Hr1G061120.2	Barley	plastid	59.81	52.55
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	50.65	44.14
PGSC0003DMT400025330	Potato	cytosol	14.77	31.35

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	EntrezGene:102594419	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Chorismate_C	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
InterPro:IPR005801	UniProt:M1BRM6	PFAM:PF00425	PFAM:PF04715	EnsemblPlantsGene:PGSC0003DMG400019952	PGSC:PGSC0003DMG400019952
EnsemblPlants:PGSC0003DMT400051367	PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	SUPFAM:SSF56322	UniParc:UPI000294DF7A
RefSeq:XP_015162657.1	SEG:seg	:	:	:	:

Description

Feedback-insensitive anthranilate synthase alpha-2 chain [Source:PGSC_GENE;Acc:PGSC0003DMG400019952]

Coordinates

chr6:-:3718454..3722410

Molecular Weight (calculated)

60376.4 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.332

Length

535 amino acids

Sequence
(BLAST)

001: MDEERFIEVS KSGNLIPLHK TIFSDHLTPV LAYRCLVKEE DRQAPSFLYE SVEGSSVGRY SVVGAQPSME IVVKEHNVTI LDHHAGKLTQ KMVEDPMTIP
101: ASISNGWKPG LIDELPDTFS GGWFGYFSYD TVRYVENNKL PFLRAPEDDR NLADIQLGLY EDVIVFDHVE KKAHVIHWVR LDQYSSLPEA YLDGKKHLEM
201: LMSRVQGIES PRLSPGSVDF CIDEFGTSLT TENMTREEYK NAILQAKEHI ASGDIHQIVL SQRFERRTFA DPFEVYRALR IVNPSTYMTY LQARGCTLVA
301: SSPETLTREK KRRIVNRPLA GTSRRGRTPD EDLMLEMQML KDVKPGFVNV ENLMSVERYS DVMHMSSTVS GELLDHLTCW DALRAALPVG TICGVPKVKA
401: MELIDQLEVG RRGPYSGGFG GISFSGDMDI GLALRTMVFM NGPRYDTMYS YTDASKRQEW VAHLQSEARI VADSDPAEKH KECENKVACL CRAIDLAEST
501: FVKGRSSVLK INGSVPNVFS RARVHEKKIL TSQMK

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.