CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11333	Canola	plastid	99.16	99.16
Bra005864.1-P	Field mustard	plastid	98.65	98.65
CDX98861	Canola	plastid	92.26	92.1
CDX70133	Canola	plastid	89.56	89.11
AT5G05730.2	Thale cress	plastid	88.05	83.81
PGSC0003DMT400084873	Potato	cytosol	9.43	70.0
KRG97759	Soybean	plastid	68.35	68.93
KRG97758	Soybean	plastid	62.96	67.88
VIT_13s0067g00400.t01	Wine grape	plastid	64.14	66.03
CDX83311	Canola	plastid	67.68	63.91
CDX95746	Canola	plastid	66.83	63.52
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	56.4	62.62
Solyc06g005980.2.1	Tomato	plastid	54.71	55.84
CDY47655	Canola	cytosol	8.42	55.56
PGSC0003DMT400069076	Potato	cytosol	9.93	48.36
CDY47888	Canola	cytosol	25.93	17.0
CDY31739	Canola	cytosol	25.08	16.57
CDX77216	Canola	cytosol	24.58	16.44
CDY65211	Canola	plastid	25.76	16.29
CDX83310	Canola	nucleus, plastid	12.29	14.37

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	GO:A0A078CVT1	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	EnsemblPlants:CDX80970	ProteinID:CDX80970	ProteinID:CDX80970.1
InterPro:Chorismate_C	ncoils:Coil	GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0004049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00134394001	InterPro:IPR005801
PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	MetaCyc:PWY-5958
MetaCyc:PWY-6660	MetaCyc:PWY-6661	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniPathway:UPA00035	UniParc:UPI0003E6BE42
SEG:seg	:	:	:	:	:

Description

BnaC03g02240D

Coordinates

chrLK031823:-:1071961..1074972

Molecular Weight (calculated)

65910.6 Da

IEP (calculated)

6.743

GRAVY (calculated)

-0.313

Length

594 amino acids

Sequence
(BLAST)

001: MSSSMNVAKV KPLSFSRRLV PSAVSRGLSS SVTVSGYSGR SSAYAPSLRS IKCVSVSPEA SIVSDTKKLA DASKSTNLVP IFRCIFSDRL TPVLAYRCLV
101: KEDDREAPSF LFESVEPGSQ MSSVGRYSVV GAQPAMEIVA KEDKVIVMDH KSGSLTEEYV EDPMEIPRKI SESWNPDPQL VQDLPDAFCG GWVGFFSYDT
201: VRYVEKRKLP FSKAPEDDRN LPDMHLGLYD DVVVFDHVEK KAYVIHWIRL DATVPYETAY SNGLQHLENL VSKLHDIAPP KLAAGNVNLQ TRQFGPALEN
301: SNVTREEYKE AVVNAKEHIL AGDIFQIVLS QRFERRTFAD PFEVYRALRV VNPSPYMGYL QARGCILVAS SPEILTKVKQ NKIVNRPLAG TSRRGKTEVE
401: DKRLEKELLE NEKQGAEHIM LVDLGRNDVG KVAKYGSVKV EKLMNIERYS HVMHISSTVT GELQDDLSCW DTLRAALPVG TVSGAPKVKA MELIDELEPT
501: RRGPYSGGFG GVSFTGDMDI ALSLRTIVFP TASQYNTMYS YKDANKRREW VAYLQAGAGV VADSDPEDEH RECQNKAAGL ARAIDLAESA FVKK

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.