CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035662.1-P	Field mustard	cytosol	98.44	98.44
CDX77216	Canola	cytosol	89.77	90.88
CDY47888	Canola	cytosol	79.64	79.03
CDY65211	Canola	plastid	81.53	78.06
AT2G28880.1	Thale cress	plastid	79.2	77.48
PGSC0003DMT400025330	Potato	cytosol	20.47	73.02
Os06t0699700-01	Rice	cytosol	23.14	62.65
VIT_13s0019g04170.t01	Wine grape	cytosol	54.84	58.83
Solyc04g049360.2.1	Tomato	plastid	54.17	53.99
KRH34882	Soybean	plastid	55.17	53.51
VIT_13s0019g04180.t01	Wine grape	cytosol	53.28	53.46
KRG91886	Soybean	mitochondrion	54.17	52.59
KXG20764	Sorghum	mitochondrion	51.28	52.45
GSMUA_Achr3P05610_001	Banana	mitochondrion	49.61	51.92
TraesCS7B01G322500.4	Wheat	plastid	50.28	50.45
TraesCS7D01G414300.2	Wheat	plastid	50.17	50.33
TraesCS7A01G422100.3	Wheat	plastid	49.72	49.72
HORVU7Hr1G097570.14	Barley	plastid	50.17	49.51
Zm00001d036484_P001	Maize	mitochondrion	50.95	47.66
CDY11333	Canola	plastid	16.57	25.08
CDX80970	Canola	plastid	16.57	25.08
CDX98861	Canola	plastid	16.13	24.37
CDX70133	Canola	plastid	16.02	24.12
CDX83311	Canola	plastid	16.02	22.89
CDX95746	Canola	plastid	15.91	22.88
CDY47655	Canola	cytosol	2.0	20.0
CDX83310	Canola	nucleus, plastid	7.56	13.39

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	KEGG:00790+2.6.1.85	Gene3D:3.60.120.10	MapMan:7.5.1.1	GO:A0A078H2U3
UniProt:A0A078H2U3	InterPro:ADC_synthase	InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	EnsemblPlants:CDY31739	ProteinID:CDY31739
ProteinID:CDY31739.1	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	InterPro:GATASE	GO:GO:0006541	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009396	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00050381001	InterPro:IPR005801
InterPro:IPR017926	InterPro:IPR029062	PFAM:PF00117	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095
PRINTS:PR00099	PFscan:PS51273	PANTHER:PTHR11236	PANTHER:PTHR11236:SF18	MetaCyc:PWY-5958	MetaCyc:PWY-6543
MetaCyc:PWY-6660	MetaCyc:PWY-6661	InterPro:Para-NH2Bz_synth_comp_1	SUPFAM:SSF52317	SUPFAM:SSF56322	TIGRFAMs:TIGR00553
UniPathway:UPA00035	UniPathway:UPA00077	UniParc:UPI0004EE5E50	SEG:seg	:	:

Description

BnaA04g16750DBnaA04g16750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2U3]

Coordinates

chrLK032278:-:204775..209319

Molecular Weight (calculated)

100251.0 Da

IEP (calculated)

6.808

GRAVY (calculated)

-0.336

Length

899 amino acids

Sequence
(BLAST)

001: MKLSCPSDNV LRFTVATRLF SSELVSIDES WKKKYISLPS CRGGTRKSGH YVPGVHLQDS SIAEKILPRT KTGERLGFVR TLLIDNYDSY TFNIYQALST
101: INGVPPVVIR NDEWTWEEAY HYLYEDAAFD NIVISPGPGS PMCPSDIGIC LRLLLECRDI PILGVCLGHQ ALGYVHGAHV VHAPEPVHGR LSGIEHDGNI
201: LFSDIPSGRN SDFKADKDSL PKELVPLAWT INDDTGSFSE KRFLVPVNNS VSPPRDGSIV SVSEKLENQS YWPSSHVDGK QDRHILMGIM HSTFPHYGLQ
301: FHPESIATTY GSQIFKNFKD ITVDYWNHCK YPSLLRRKIN GTTKMQVPGA CELLKELSRS RNTENGSSYN GNPVTSLSTA KKNGVDVLEP NAKLLRLKWK
401: KLERLAHKVG GARNIFMQLF GKSRGHDTFW LDTSSSDKAR GRFSFMGGKG GSLWKQLTFS LSDQSEITSK HGGHLLIEDA YSSTEKRFLK EGFLDFLRKE
501: LSSISYDEKD FEGLPFDFYG GYVGCIGYDI KVECGMPNNR HKSKAPDACF FFVDNIVAID HHLDDVYVLS LHQDGTVETS FLKDTEEKLI SMNVSSTRKW
601: KDQTNPPIDS STSFVPDKSR EQYINDVERC MQYIKDGESY ELCLTTQNRL KIGNTDPLGL YLHLRERNPA PYAAFLNFSN ANVSLCCSSP ERFLKLDRHG
701: VLEAKPIKGT MARGSTPEED ELLKLQLKLS EKNQAENLMI VDLLRNDLGR VCEPGSVHVP NLMDVETYTT VHTMVSTVRG LKKSDISPVE CVRAAFPGGS
801: MTGAPKLRSV EILDSLEKCS RGLYSGSIGY FSYNGTFDLN IVIRTVVIHE GEASIGAGGA IVALSNAVDE FEEMVLKTRA PANVVIEFCR GGSVDLIDK

Best Arabidopsis Sequence Match ( AT2G28880.1 )
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Arabidopsis Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.