Factsheet for TraesCS7B01G322500.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G414300.2	Wheat	plastid	96.09	96.09
TraesCS7A01G422100.3	Wheat	plastid	96.09	95.77
HORVU7Hr1G097570.14	Barley	plastid	86.5	85.07
Os06t0699700-01	Rice	cytosol	28.01	75.6
PGSC0003DMT400025330	Potato	cytosol	20.54	73.02
KXG20764	Sorghum	mitochondrion	69.2	70.53
Zm00001d036484_P001	Maize	mitochondrion	67.75	63.16
GSMUA_Achr3P05610_001	Banana	mitochondrion	54.13	56.46
VIT_13s0019g04170.t01	Wine grape	cytosol	52.34	55.97
Solyc04g049360.2.1	Tomato	plastid	52.34	52.0
VIT_13s0019g04180.t01	Wine grape	cytosol	50.56	50.56
AT2G28880.1	Thale cress	plastid	51.79	50.49
KRH34882	Soybean	plastid	52.12	50.38
CDY47888	Canola	cytosol	50.89	50.33
CDY31739	Canola	cytosol	50.45	50.28
CDX77216	Canola	cytosol	49.78	50.23
Bra035662.1-P	Field mustard	cytosol	49.89	49.72
KRG91886	Soybean	mitochondrion	51.34	49.68
Bra011921.1-P	Field mustard	cytosol, plastid	50.78	48.56
CDY65211	Canola	plastid	50.45	48.14
TraesCS5B01G502700.1	Wheat	plastid	15.74	23.04
TraesCS4B01G214500.2	Wheat	plastid	14.51	21.67

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	KEGG:00790+2.6.1.85	Gene3D:3.60.120.10	MapMan:7.5.1.1	InterPro:ADC_synthase
InterPro:Anth_synth_I_N	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	InterPro:GATASE	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009396	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0046417	GO:GO:0046820	InterPro:IPR005801	InterPro:IPR017926	InterPro:IPR029062	PFAM:PF00117
PFAM:PF00425	PFAM:PF04715	PRINTS:PR00096	PRINTS:PR00097	PRINTS:PR00099	PFscan:PS51273
PANTHER:PTHR11236	PANTHER:PTHR11236:SF18	InterPro:Para-NH2Bz_synth_comp_1	SUPFAM:SSF52317	SUPFAM:SSF56322	TIGRFAMs:TIGR00553
EnsemblPlantsGene:TraesCS7B01G322500	EnsemblPlants:TraesCS7B01G322500.4	TIGR:cd01743	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:573020821..573026730

Molecular Weight (calculated)

99577.9 Da

IEP (calculated)

7.093

GRAVY (calculated)

-0.384

Length

896 amino acids

Sequence
(BLAST)

001: MAALRLSAPP TARWSPPQPS SARWQQPPCR GGARRPAALR AGGDEGPGPE EPPVRTLLID NYDSYTYNIF QELSVVNGVP PVVVRNDEWA WRDVYHWVYK
101: KRAFDNIVIS PGPGSPACPT DIGVCLRILC ECGDIPILGV CLGHQALGLV HGAKIVHAPE AIHGRLSEIE HNGCYLFNRI PSGINSGFKV VRYHSLVIEA
201: SSLPEDLVSI AWTASPRMLS FLDSDKSDNT SFWGSLNNFS IADPSGRTNN REVPITINNA TKPDGYKIVM GIKHSSMPHY GVQFHPESVA THYGRQIFQN
301: FKRITTEFGS QSSLFQERKV HSIGKLESPQ VNSADQCNYV PKGLSHTEGL EFGDSVRVHM LAERNSEKKH LRLRWKRIDN FLSRTGSSED IFSELFGHQN
401: AEDTFWLDSS SVDQNRARFS FMGGKGGPLW KQMTFHLSNQ RANCRGTITI RDAHGSAVKN SLKDGFLEFL HKEIQSIKYD EEDFEGLPFD FHGGFVGYLG
501: YGLKVECDAS SNKAKSSTPD ACFFFADNLV AIDHNNGDVY ILSLYDEYSL SNGNGMHHNT THTSWLLETE KKLLRMAAMS PGLPTYGKSL IGSSNVNKQS
601: FVVEKSKDQY IKDVRSCLDY IRDGESYELC LTTRMRRGIE YINALQLYLK LRKQNPAPYA AWLNFSSENL SICCSSPERF LRLDQNAVLE AKPIKGTIAR
701: GRTPEEDECL RLQLKYSEKD QAENLMIVDL LRNDLGKVCE PGSVHVPRLM DVESYKSVHT MVSTIRGTKK PDLSPVDCIK AAFPGGSMTG APKVRSMEIL
801: DALESSPRGI YSGSIGFFSY NRTFDLNIVI RTVVLHDGEA SVGAGGAIVA LSDPEAEYAE MMLKARTPTR VVEECSQQAA AHSSPDRSDS VRTTIS

Best Arabidopsis Sequence Match ( AT2G28880.1 )
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Arabidopsis Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.