Factsheet for AT2G28880.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47888	Canola	cytosol	80.2	81.35
CDY31739	Canola	cytosol	77.48	79.2
Bra035662.1-P	Field mustard	cytosol	77.04	78.75
Bra011921.1-P	Field mustard	cytosol, plastid	80.09	78.55
CDY65211	Canola	plastid	79.98	78.27
CDX77216	Canola	cytosol	75.08	77.7
PGSC0003DMT400025330	Potato	cytosol	20.78	75.79
Os06t0699700-01	Rice	cytosol	23.18	64.16
VIT_13s0019g04170.t01	Wine grape	cytosol	55.17	60.5
Solyc04g049360.2.1	Tomato	plastid	54.52	55.54
KRH34882	Soybean	plastid	55.71	55.23
VIT_13s0019g04180.t01	Wine grape	cytosol	53.65	55.02
KRG91886	Soybean	mitochondrion	54.41	54.0
GSMUA_Achr3P05610_001	Banana	mitochondrion	50.16	53.67
KXG20764	Sorghum	mitochondrion	50.16	52.45
TraesCS7B01G322500.4	Wheat	plastid	50.49	51.79
TraesCS7D01G414300.2	Wheat	plastid	50.16	51.45
HORVU7Hr1G097570.14	Barley	plastid	50.6	51.04
TraesCS7A01G422100.3	Wheat	plastid	49.84	50.95
Zm00001d036484_P001	Maize	mitochondrion	50.92	48.7
AT3G55870.3	Thale cress	plastid	15.23	23.69
AT2G29690.1	Thale cress	plastid	15.89	23.51
AT5G05730.2	Thale cress	plastid	15.45	22.76

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	KEGG:00790+2.6.1.85	Gene3D:3.60.120.10	MapMan:7.5.1.1	EntrezGene:817437
ProteinID:AAC79592.1	InterPro:ADC_synthase	ProteinID:AEC08184.1	ArrayExpress:AT2G28880	EnsemblPlantsGene:AT2G28880	RefSeq:AT2G28880
TAIR:AT2G28880	RefSeq:AT2G28880-TAIR-G	EnsemblPlants:AT2G28880.1	TAIR:AT2G28880.1	EMBL:AY096797	InterPro:Anth_synth_I_N
Unigene:At.38555	EMBL:BK001419	EMBL:BT002702	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	InterPro:GATASE
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0008153	GO:GO:0009058	GO:GO:0009396
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0046417	GO:GO:0046654
GO:GO:0046656	GO:GO:0046820	InterPro:IPR005801	InterPro:IPR017926	InterPro:IPR029062	RefSeq:NP_850127.1
PFAM:PF00117	PFAM:PF00425	PFAM:PF04715	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00096	PRINTS:PR00097	PRINTS:PR00099	PFscan:PS51273	PANTHER:PTHR11236	PANTHER:PTHR11236:SF18
InterPro:Para-NH2Bz_synth_comp_1	UniProt:Q8LPN3	SUPFAM:SSF52317	SUPFAM:SSF56322	TIGRFAMs:TIGR00553	UniParc:UPI00000AC15F
Symbol:emb1997	:	:	:	:	:

Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]

Coordinates

chr2:-:12398745..12403621

Molecular Weight (calculated)

102925.0 Da

IEP (calculated)

6.606

GRAVY (calculated)

-0.347

Length

919 amino acids

Sequence
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.