Factsheet for GSMUA_Achr3P05610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025330	Potato	cytosol	22.47	76.59
Os06t0699700-01	Rice	cytosol	25.03	64.76
VIT_13s0019g04170.t01	Wine grape	cytosol	56.58	58.0
VIT_13s0019g04180.t01	Wine grape	cytosol	56.93	54.58
TraesCS7D01G414300.2	Wheat	plastid	56.69	54.35
KXG20764	Sorghum	mitochondrion	55.53	54.27
TraesCS7B01G322500.4	Wheat	plastid	56.46	54.13
HORVU7Hr1G097570.14	Barley	plastid	57.28	54.01
TraesCS7A01G422100.3	Wheat	plastid	56.34	53.84
Solyc04g049360.2.1	Tomato	plastid	56.46	53.77
KRH34882	Soybean	plastid	56.34	52.21
KRG91886	Soybean	mitochondrion	54.71	50.76
AT2G28880.1	Thale cress	plastid	53.67	50.16
CDY31739	Canola	cytosol	51.92	49.61
CDX77216	Canola	cytosol	51.22	49.55
Zm00001d036484_P001	Maize	mitochondrion	55.41	49.53
CDY47888	Canola	cytosol	52.15	49.45
Bra035662.1-P	Field mustard	cytosol	51.22	48.94
CDY65211	Canola	plastid	52.27	47.82
Bra011921.1-P	Field mustard	cytosol, plastid	52.15	47.81
GSMUA_Achr9P07690_001	Banana	mitochondrion	15.37	22.15

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	KEGG:00790+2.6.1.85	Gene3D:3.40.50.880	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.2
MapMan:7.5.1.1	InterPro:ADC_synthase	InterPro:Anth_synth_I_N	InterPro:Chorismate_C	InterPro:Class_I_gatase-like	InterPro:GATASE
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006541	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009396	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0046417	GO:GO:0046820	EnsemblPlantsGene:GSMUA_Achr3G05610_001
EnsemblPlants:GSMUA_Achr3P05610_001	EnsemblPlants:GSMUA_Achr3T05610_001	InterPro:IPR005801	InterPro:IPR017926	InterPro:IPR029062	UniProt:M0SC29
PFAM:PF00117	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00096	PRINTS:PR00097	PRINTS:PR00099
PFscan:PS51273	PANTHER:PTHR11236	PANTHER:PTHR11236:SF18	InterPro:Para-NH2Bz_synth_comp_1	SUPFAM:SSF52317	SUPFAM:SSF56322
TIGRFAMs:TIGR00553	TIGRFAMs:TIGR00566	InterPro:TrpG/PapA_dom	UniParc:UPI000294B78B	SEG:seg	:

Description

Putative Para-aminobenzoate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr3G05610_001]

Coordinates

chr3:-:3724184..3734414

Molecular Weight (calculated)

95991.1 Da

IEP (calculated)

6.892

GRAVY (calculated)

-0.258

Length

859 amino acids

Sequence
(BLAST)

001: MSAISWRPSA RAVARGLAPR PVLSPRLAPR SLALIPDLAA RPISPLVARR RAHGGGLGNP GDAEDGEEEG ENEISSDDVV RTLLIDNYDS YTYNIYQELS
101: VVNGVPPVVV HNDEWTWEYI YHCLYKEKTF DNIVISPGPG TPTCPKDIGI CHQILLECKD IPILGVCLGH QVLGFVHGAD IVHAPEPIHG RLSEIEHTGC
201: DLFKDIPSGI NSGFKVVRYH SLVINADSLP KELIPIAWIS KPIRKLLMAV RHSTRPHYGV QFHPESVATY HGRQMFKNFK KMTVDYGMRR SLLHERQVSR
301: ACQSLEELPK GELLWERSAI RQFVDVYGIS MPLLKGVDVK YLSLQWKKFD SLLSEVGGSE NIFRELLGDY NVDNTFWLDS SSTDKGRARF SFMGGKGGPL
401: WKQLTFRLSE KTPSCQVGHK KRSGHNCICF SKTTIEAGGY LTIEDIYGSL KTIFVRDGLF DFLKKELESF HYDRRDYEGL PFDFCGGYIG YLGYELKVEC
501: GASFNGHKSK APDACFFFAD NLVVIDHWYG DVYILSLHDN HNSDTWMGQH ANLKGKSWVA ETEKRLLSLK SLSTKKSQYI KDVEKCLQLI KDGESYELCL
601: TTQMMKKVDN LNAFNLYLGL RNQNPAPYAA WLNFTREDLC ICCSSPERFL RLDGNGMLEA KPIKGTIARG RTPDEDEHLR LQLQYSEKDQ AENLMIVDLL
701: RNDLGRVCEP GSVCVPCLME VESYATVHTL VSTIQGKRKS NASPIDCVRA AFPGGSMTGA PKLRSMELLD SLESCSRGIY SGSIGFFSYN QTFDLNIVIR
801: TVIIHKGEAS VGAGGAVTAL SIPEDEYAEM MLKAKAPTKA VEECSKDLDT CGSSMKMVS

Best Arabidopsis Sequence Match ( AT2G28880.1 )
(BLAST)

001: MNMNFSFCST SSELSYPSEN VLRFSVASRL FSPKWKKSFI SLPCRSKTTR KVLASSRYVP GKLEDLSVVK KSLPRREPVE KLGFVRTLLI DNYDSYTFNI
101: YQALSTINGV PPVVIRNDEW TWEEAYHYLY EDVAFDNIVI SPGPGSPMCP ADIGICLRLL LECRDIPILG VCLGHQALGY VHGAHVVHAP EPVHGRLSGI
201: EHDGNILFSD IPSGRNSDFK VVRYHSLIID KESLPKELVP IAWTIYDDTG SFSEKNSCVP VNNTGSPLGN GSVIPVSEKL ENRSHWPSSH VNGKQDRHIL
301: MGIMHSSFPH YGLQFHPESI ATTYGSQLFK NFKDITVNYW SRCKSTSLRR RNINDTANMQ VPDATQLLKE LSRTRCTGNG SSYFGNPKSL FSAKTNGVDV
401: FDMVDSSYPK PHTKLLRLKW KKHERLAHKV GGVRNIFMEL FGKNRGNDTF WLDTSSSDKA RGRFSFMGGK GGSLWKQLTF SLSDQSEVTS KHAGHLLIED
501: SQSSTEKQFL EEGFLDFLRK ELSSISYDEK DFEELPFDFC GGYVGCIGYD IKVECGMPIN RHKSNAPDAC FFFADNVVAI DHQLDDVYIL SLYEEGTAET
601: SFLNDTEEKL ISLMGLSTRK LEDQTLPVID SSQSKTSFVP DKSREQYIND VQSCMKYIKD GESYELCLTT QNRRKIGNAD PLGLYLHLRE RNPAPYAAFL
701: NFSNANLSLC SSSPERFLKL DRNGMLEAKP IKGTIARGST PEEDEFLKLQ LKLSEKNQAE NLMIVDLLRN DLGRVCEPGS VHVPNLMDVE SYTTVHTMVS
801: TIRGLKKTDI SPVECVRAAF PGGSMTGAPK LRSVEILDSL ENCSRGLYSG SIGYFSYNGT FDLNIVIRTV IIHEDEASIG AGGAIVALSS PEDEFEEMIL
901: KTRAPANAVM EFCSDQRRQ

Arabidopsis Description

ADCSAminodeoxychorismate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.