CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98861	Canola	plastid	94.47	94.79
CDY11333	Canola	plastid	89.45	89.9
CDX80970	Canola	plastid	89.11	89.56
AT5G05730.2	Thale cress	plastid	91.96	87.98
PGSC0003DMT400084873	Potato	cytosol	9.38	70.0
KRG97759	Soybean	plastid	68.84	69.78
KRG97758	Soybean	plastid	63.82	69.15
VIT_13s0067g00400.t01	Wine grape	plastid	65.33	67.59
CDX83311	Canola	plastid	67.67	64.23
CDX95746	Canola	plastid	66.67	63.68
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	56.11	62.62
Solyc06g005980.2.1	Tomato	plastid	54.44	55.84
CDY47655	Canola	cytosol	8.38	55.56
PGSC0003DMT400069076	Potato	cytosol	9.88	48.36
CDY47888	Canola	cytosol	24.79	16.34
CDX77216	Canola	cytosol	23.95	16.1
CDY31739	Canola	cytosol	24.12	16.02
CDY65211	Canola	plastid	24.96	15.87
CDX83310	Canola	nucleus, plastid	11.89	13.98

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	GO:A0A078C584	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	EnsemblPlants:CDX70133	ProteinID:CDX70133	ProteinID:CDX70133.1
InterPro:Chorismate_C	ncoils:Coil	GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0004049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00136244001	InterPro:IPR005801
PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	MetaCyc:PWY-5958
MetaCyc:PWY-6660	MetaCyc:PWY-6661	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniPathway:UPA00035	UniParc:UPI0004EEEB34
SEG:seg	:	:	:	:	:

Description

BnaA10g24820D

Coordinates

chrLK031790:+:3267451..3270593

Molecular Weight (calculated)

66391.0 Da

IEP (calculated)

6.460

GRAVY (calculated)

-0.347

Length

597 amino acids

Sequence
(BLAST)

001: MSSSMNVASM QQPLSFSRRL APSVASSHVL SSSSVTVTGY SRRSSPYAPS HRSIKCVSAP PEASIVTDTK KLADASKSTN LIPIYTCIFS DQLTPVLAYR
101: CLVKEDDREA PSFLFESVEP GSQMSSVGRY SVVGAQPAME IVAKENKVIV MDHKNGSMTE EYVEDPMEIP RKISESWNPD PQLVQDLPDA FCGGWVGFFS
201: YDTVRYVEKR KLPFSKAPED DRNLPDMHLG LYDDVIVFDH VEKKAYVIHW IRLDGSVPYE KAYSNGVQHL ETLVAKLHDI EPPKLAAGNV NLQTRQFGPA
301: LENSNVTREE YKEAVVNAKE HILAGDIFQI VLSQRFERRT FADPFEVYRA LRVVNPSPYM GYLQARGCIL VASSPEILTK VKQNKIVNRP LAGTSRRGKT
401: DVEDKRLEKE LLENEKQCAE HIMLVDLGRN DVGKVAKYGS VKVEKLLNIE RYSHVMHISS TVTGELQDDL SCWDTLRAAL PVGTVSGAPK VKAMELIDEL
501: EPTRRGPYSG GFGGVSFTGD MDIALSLRTI VFPTASQYNT MYSYKDANKR REWVAYLQAG AGVVADSDPE DEHRECQNKA AGLARAIDLA ESAFVKK

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.