Factsheet for Zm00001d012925_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034713_P002	Maize	plastid	88.75	84.38
Os03t0826500-01	Rice	plastid	81.66	81.8
TraesCS5D01G503800.1	Wheat	plastid	79.93	75.37
TraesCS5B01G502700.1	Wheat	plastid	79.41	75.0
PGSC0003DMT400084873	Potato	cytosol	9.86	71.25
KRH36143	Soybean	plastid	45.67	70.03
KRG90616	Soybean	nucleus, plastid	67.47	68.78
PGSC0003DMT400010634	Potato	cytosol	69.55	68.48
Solyc06g006100.2.1	Tomato	plastid	69.03	67.97
Bra005864.1-P	Field mustard	plastid	66.78	64.98
Bra009130.1-P	Field mustard	plastid	66.95	64.82
VIT_06s0004g06320.t01	Wine grape	plastid	68.17	64.8
KRG97759	Soybean	plastid	65.74	64.52
AT3G55870.3	Thale cress	plastid	65.92	64.47
Zm00001d028536_P001	Maize	plastid	67.3	64.4
KRG97758	Soybean	plastid	60.9	63.88
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	67.13	63.19
AT2G29690.1	Thale cress	plastid	67.13	62.48
AT5G05730.2	Thale cress	plastid	66.09	61.22
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	56.57	61.12
VIT_13s0067g00400.t01	Wine grape	plastid	60.73	60.83
CDY47655	Canola	cytosol	9.34	60.0
Solyc06g005980.2.1	Tomato	plastid	56.06	55.67
PGSC0003DMT400069076	Potato	cytosol	10.03	47.54
Bra000473.1-P	Field mustard	plastid	65.74	33.6
Zm00001d036484_P001	Maize	mitochondrion	25.61	15.4

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	UniProt:A0A1D6GDZ9	InterPro:ADC_synthase
ProteinID:AQK61843.1	InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	InterPro:Chorismate_C	GO:GO:0000162
GO:GO:0003674	GO:GO:0003824	GO:GO:0004049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR005801	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236
PANTHER:PTHR11236:SF33	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniParc:UPI0002217837	EnsemblPlantsGene:Zm00001d012925	EnsemblPlants:Zm00001d012925_P001
EnsemblPlants:Zm00001d012925_T001	SEG:seg	:	:	:	:

Description

Anthranilate synthase alpha subunit 2 chloroplastic

Coordinates

chr5:+:2065025..2068818

Molecular Weight (calculated)

64482.3 Da

IEP (calculated)

7.430

GRAVY (calculated)

-0.283

Length

578 amino acids

Sequence
(BLAST)

001: MATVSLALSL RFAPSSRPLN LHRRRPDAVT CRATTATFHR LDAVAVREEE SKFRRAAAEG CNLVPITRSI FSDHLTPVLA YRCLVKEDDR EAPSFLFESV
101: EQGSEGTNMG RYSVVAAQPA MEVLAKANKV TVMDHELKSR REHLVPDPMK IPRTIMEQWN PPQVTDGLPD AFCGGWVGFF SYDTVRYVET KKLPFSKAPH
201: DDRNIPDMHL GLYTNVIVFD HVEKKMHVIH WVRTDCYQSL DEAYEDGTNR LESLLSRLHC FNVPTLSSGS IKLNVGGFGS ATLKSNMSKE EYKNIVVQAK
301: EHILAGDIFQ AVLSQRLERR TFADPFEIYR ALRIVNPSPY MAYLQARGCI LVASSPEILT RVQKRTVVNR PLAGTIRRGK TKAEDKVLEQ LLLSDEKQRA
401: EHIMLVDLGR NDVGKVSKPG SVKVEKLMNI ERYSHVMHIS STVTGELRDD LTCWDALRAA LPVGTVSGAP KVRAMELIDE LEADMRGPYS GGFGGISFNG
501: DMDIALALRT IVFPTASRFD TMYSYANGKS RQEWIAHLQA GAGIVADSKP DDEHQECLNK AAGAARAIDL AESTFLQE

Best Arabidopsis Sequence Match ( AT5G05730.1 )
(BLAST)

001: MSSSMNVATM QALTFSRRLL PSVASRYLSS SSVTVTGYSG RSSAYAPSFR SIKCVSVSPE ASIVSDTKKL ADASKSTNLI PIYRCIFSDQ LTPVLAYRCL
101: VKEDDREAPS FLFESVEPGS QMSSVGRYSV VGAQPAMEIV AKENKVIVMD HNNETMTEEF VEDPMEIPRK ISEKWNPDPQ LVQDLPDAFC GGWVGFFSYD
201: TVRYVEKRKL PFSKAPEDDR NLPDMHLGLY DDVVVFDHVE KKAYVIHWIR LDGSLPYEKA YSNGMQHLEN LVAKLHDIEP PKLAAGNVNL QTRQFGPSLD
301: NSNVTCEEYK EAVVKAKEHI LAGDIFQIVL SQRFERRTFA DPFEVYRALR VVNPSPYMGY LQARGCILVA SSPEILTKVK QNKIVNRPLA GTSKRGKNEV
401: EDKRLEKELL ENEKQCAEHI MLVDLGRNDV GKVTKYGSVK VEKLMNIERY SHVMHISSTV TGELQDGLTC WDVLRAALPV GTVSGAPKVK AMELIDELEP
501: TRRGPYSGGF GGVSFTGDMD IALSLRTIVF PTACQYNTMY SYKDANKRRE WVAYLQAGAG VVADSDPQDE HCECQNKAAG LARAIDLAES AFVKK

Arabidopsis Description

ASA1Anthranilate synthase alpha subunit 1 [Source:UniProtKB/TrEMBL;Acc:F4K0T5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.