Factsheet for VIT_06s0004g06320.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90616	Soybean	nucleus, plastid	75.16	80.6
PGSC0003DMT400010634	Potato	cytosol	76.97	79.73
Solyc06g006100.2.1	Tomato	plastid	76.81	79.56
KRH36143	Soybean	plastid	48.36	77.98
GSMUA_Achr9P07690_001	Banana	mitochondrion	69.41	70.81
KXG37227	Sorghum	mitochondrion, plastid	66.61	70.19
Os03t0826500-01	Rice	plastid	66.12	69.67
Zm00001d028536_P001	Maize	plastid	68.59	69.04
AT2G29690.1	Thale cress	plastid	70.39	68.92
CDX83311	Canola	plastid	71.05	68.68
CDX95746	Canola	plastid	70.56	68.64
VIT_13s0067g00400.t01	Wine grape	plastid	64.8	68.28
Zm00001d012925_P001	Maize	plastid	64.8	68.17
Os03t0264400-01	Rice	plastid	67.93	68.15
KXG39728	Sorghum	plastid	67.43	67.88
Zm00001d034713_P002	Maize	plastid	67.43	67.43
TraesCS4B01G214500.2	Wheat	plastid	66.45	67.33
TraesCS4A01G089800.1	Wheat	plastid	66.61	67.16
TraesCS4D01G215100.1	Wheat	plastid	66.45	66.89
HORVU4Hr1G061120.2	Barley	plastid	66.61	66.5
TraesCS5D01G503800.1	Wheat	plastid	66.28	65.74
TraesCS5B01G502700.1	Wheat	plastid	65.79	65.36
HORVU5Hr1G115160.1	Barley	cytosol, mitochondrion, plastid	54.44	53.91
Bra000473.1-P	Field mustard	plastid	70.72	38.02
VIT_13s0019g04170.t01	Wine grape	cytosol	23.36	16.95
VIT_13s0019g04180.t01	Wine grape	cytosol	22.86	15.51

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	EntrezGene:100255399	wikigene:100255399	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1
ProteinID:ACY29654	ProteinID:ACY29654.1	InterPro:ADC_synthase	ProteinID:AGJ70266	ProteinID:AGJ70266.1	InterPro:Anth_synth_I-like
InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	ProteinID:CCB43490	ProteinID:CCB43490.1	InterPro:Chorismate_C	UniProt:F6GUT2
EMBL:FN594951	GO:GO:0000162	GO:GO:0003674	GO:GO:0003824	GO:GO:0004049	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	EMBL:GU060638	InterPro:IPR005801
EMBL:KC676587	EntrezGene:LOC100255399	wikigene:LOC100255399	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095
PANTHER:PTHR11236	PANTHER:PTHR11236:SF33	SUPFAM:SSF56322	TIGR:TC64696	TIGRFAMs:TIGR00564	UniParc:UPI0002108C1F
ArrayExpress:VIT_06s0004g06320	EnsemblPlantsGene:VIT_06s0004g06320	EnsemblPlants:VIT_06s0004g06320.t01	unigene:Vvi.20833	RefSeq:XP_002279476	RefSeq:XP_002279476.1
RefSeq:XP_010650923.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:+:7107663..7113284

Molecular Weight (calculated)

67497.0 Da

IEP (calculated)

7.111

GRAVY (calculated)

-0.222

Length

608 amino acids

Sequence
(BLAST)

001: METLAASHRL LPANRRFDAA PTCGNSNCRA TNVVFGNGRG LNGVSDNGRA LTSGSLALVS SGRRWHAVAC LSHSSPSLVD HSAKFFEAAK KGNLIPLHRS
101: IFSDHLTPVL AYRCLVKEDD RDAPSFLYES VEPGIQSSNV GRYSVIGAQP TIEIVAKENM VTIMDHEAGS RTEEIVEDPM SIPRRMMEGW KPQLLDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFLSAPK DDRNLPDVHL GLYEDVLVFD HVKKQVFVIH WVRLDQYSSV EEAFNDGMNR LEALVSRVHD IVPPKLAAGS
301: IKLQTGLFGP SLEKSTMTCD EYMKAVLEAK EHILAGDIFQ IVLSQRFERR TFADPFEVYR ALRIVNPSPY MTYLQARGCI LVASSPEILT RVKKNRIINR
401: PLAGTVRRGK TPKEDIMLEN QLRNDEKQCA EHIMLVDLGR NDVGKVSKPG SVTVEKLMNI ERYSHVMHIS STVTGELLDH LTSWDALRAA LPVGTVSGAP
501: KVKAMELIDQ LEVTRRGPYS GGFGGISFSG DMDIALALRT IVFPSGSRFD TMFSYKDMNK RREWVAHLQA GAGIVADSVP ADEQRECENK AAALARAIDL
601: AESSFIEK

Best Arabidopsis Sequence Match ( AT2G29690.1 )
(BLAST)

001: MSAVSISAVK SDFFTVEAIA VTHHRTPHPP HFPSLRFPLS LKSPPATSLN LVAGSKLLHF SRRLPSIKCS YTPSLDLSEE QFTKFKKASE KGNLVPLFRC
101: VFSDHLTPIL AYRCLVKEDD RDAPSFLFES VEPGSQSSNI GRYSVVGAQP TIEIVAKGNV VTVMDHGASL RTEEEVDDPM MVPQKIMEEW NPQGIDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFSNAPE DDRSLPDVNL GLYDDVIVFD HVEKKAYVIH WVRIDKDRSV EENFREGMNR LESLTSRIQD QKPPKMPTGF
301: IKLRTQLFGP KLEKSTMTSE AYKEAVVEAK EHILAGDIFQ IVLSQRFERR TFADPFEIYR ALRIVNPSPY MAYLQVRGCI LVASSPEILL RSKNRKITNR
401: PLAGTVRRGK TPKEDLMLEK ELLSDEKQCA EHIMLVDLGR NDVGKVSKPG SVEVKKLKDI EWFSHVMHIS STVVGELLDH LTSWDALRAV LPVGTVSGAP
501: KVKAMELIDE LEVTRRGPYS GGFGGISFNG DMDIALALRT MVFPTNTRYD TLYSYKHPQR RREWIAHIQA GAGIVADSNP DDEHRECENK AAALARAIDL
601: AESSFLEAPE FTTITPHINN I

Arabidopsis Description

ASA2Anthranilate synthase alpha subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P32069]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.