CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028536_P001	Maize	plastid	90.73	90.73
Os03t0264400-01	Rice	plastid	86.42	86.14
TraesCS4A01G089800.1	Wheat	plastid	83.28	83.42
TraesCS4B01G214500.2	Wheat	plastid	82.45	83.0
TraesCS4D01G215100.1	Wheat	plastid	82.28	82.28
HORVU4Hr1G061120.2	Barley	plastid	82.28	81.61
KRH36143	Soybean	plastid	44.54	71.35
GSMUA_Achr9P07690_001	Banana	mitochondrion	70.2	71.14
KRG90616	Soybean	nucleus, plastid	66.06	70.37
Solyc06g006100.2.1	Tomato	plastid	68.21	70.19
PGSC0003DMT400010634	Potato	cytosol	68.05	70.02
VIT_06s0004g06320.t01	Wine grape	plastid	67.88	67.43
KXG37227	Sorghum	mitochondrion, plastid	64.24	67.24
KRG97759	Soybean	plastid	64.24	65.87
Bra005864.1-P	Field mustard	plastid	64.24	65.32
Bra009130.1-P	Field mustard	plastid	64.4	65.16
AT3G55870.3	Thale cress	plastid	63.58	64.97
KRG97758	Soybean	plastid	59.27	64.97
VIT_13s0067g00400.t01	Wine grape	plastid	61.26	64.12
PGSC0003DMT400084873	Potato	cytosol	8.44	63.75
AT2G29690.1	Thale cress	plastid	64.74	62.96
AT5G05730.2	Thale cress	plastid	63.41	61.38
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	54.3	61.31
Solyc06g005980.2.1	Tomato	plastid	53.81	55.84
PGSC0003DMT400069076	Potato	cytosol	10.26	50.82
Bra000473.1-P	Field mustard	plastid	66.06	35.28
KXG20764	Sorghum	mitochondrion	23.34	16.04

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	UniProt:A0A1B6QP78	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	InterPro:Chorismate_C	GO:GO:0000162	GO:GO:0003674
GO:GO:0003824	GO:GO:0004049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005801	EnsemblPlants:KXG39728	ProteinID:KXG39728	ProteinID:KXG39728.1	PFAM:PF00425	PFAM:PF04715
PRINTS:PR00095	PANTHER:PTHR11236	PANTHER:PTHR11236:SF32	MetaCyc:PWY-5958	MetaCyc:PWY-6660	MetaCyc:PWY-6661
EnsemblPlantsGene:SORBI_3001G427700	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniParc:UPI0002207051	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:70685568..70690131

Molecular Weight (calculated)

66612.3 Da

IEP (calculated)

7.322

GRAVY (calculated)

-0.343

Length

604 amino acids

Sequence
(BLAST)

001: MESLAATSVF SPSRAAVPAG GARVRAGTVV STRRRSSSRS GAIGVKCSTV APQASSAVSR SAVAAKAAEE DKRRFFEAAA RGSGKGNLVP MWECIVSDHL
101: TPVLAYRCLV PEDNVDAPSF LFESVEQGPQ GTTNVGRYSM VGAHPVMEIV AKEHKVTIMD HEKGHVTEQV VDDPMQVPRN MMEGWHPQQI DELPESFSGG
201: WVGFFSYDTV RYVEKKKLPF SGAPQDDRNL PDVHLGLYDD VLVFDNVEKK VYVIHWVNVD RHASVEEAYQ DGRSRLNLLL SKVHNSNVPT LSPGFVKLHT
301: RQFGAPLNKS TMTSDEYKHV VMQAKEHIMA GDIFQIVLSQ RFERRTYANP FEVYRALRIV NPSPYMAYVQ ARGCVLVASS PEILTRVSKG KIINRPLAGT
401: ARRGKTEKED QMQEQQLLSD EKQCAEHIML VDLGRNDVGK VSKPGSVKVE KLMNIERYSH VMHISSTVSG QLDDHLQSWD ALRAALPVGT VSGAPKVKAM
501: ELIDKLEVTR RGPYSGGLGG ISFDGDMQIA LSLRTMVFST APSHNTMYSY KDADRRREWV AHLQAGAGIV ADSCPDDEQR ECENKAAALA RAIDLAESAF
601: VDKE

Best Arabidopsis Sequence Match ( AT2G29690.1 )
(BLAST)

001: MSAVSISAVK SDFFTVEAIA VTHHRTPHPP HFPSLRFPLS LKSPPATSLN LVAGSKLLHF SRRLPSIKCS YTPSLDLSEE QFTKFKKASE KGNLVPLFRC
101: VFSDHLTPIL AYRCLVKEDD RDAPSFLFES VEPGSQSSNI GRYSVVGAQP TIEIVAKGNV VTVMDHGASL RTEEEVDDPM MVPQKIMEEW NPQGIDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFSNAPE DDRSLPDVNL GLYDDVIVFD HVEKKAYVIH WVRIDKDRSV EENFREGMNR LESLTSRIQD QKPPKMPTGF
301: IKLRTQLFGP KLEKSTMTSE AYKEAVVEAK EHILAGDIFQ IVLSQRFERR TFADPFEIYR ALRIVNPSPY MAYLQVRGCI LVASSPEILL RSKNRKITNR
401: PLAGTVRRGK TPKEDLMLEK ELLSDEKQCA EHIMLVDLGR NDVGKVSKPG SVEVKKLKDI EWFSHVMHIS STVVGELLDH LTSWDALRAV LPVGTVSGAP
501: KVKAMELIDE LEVTRRGPYS GGFGGISFNG DMDIALALRT MVFPTNTRYD TLYSYKHPQR RREWIAHIQA GAGIVADSNP DDEHRECENK AAALARAIDL
601: AESSFLEAPE FTTITPHINN I

Arabidopsis Description

ASA2Anthranilate synthase alpha subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P32069]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.