Factsheet for Zm00001d028536_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39728	Sorghum	plastid	90.73	90.73
Os03t0264400-01	Rice	plastid	88.41	88.12
TraesCS4B01G214500.2	Wheat	plastid	83.44	84.0
TraesCS4D01G215100.1	Wheat	plastid	83.28	83.28
TraesCS4A01G089800.1	Wheat	plastid	83.11	83.25
HORVU4Hr1G061120.2	Barley	plastid	83.11	82.43
KRH36143	Soybean	plastid	45.36	72.68
GSMUA_Achr9P07690_001	Banana	mitochondrion	70.36	71.31
KRG90616	Soybean	nucleus, plastid	66.56	70.9
Solyc06g006100.2.1	Tomato	plastid	68.05	70.02
PGSC0003DMT400010634	Potato	cytosol	68.05	70.02
VIT_06s0004g06320.t01	Wine grape	plastid	69.04	68.59
Zm00001d012925_P001	Maize	plastid	64.4	67.3
Zm00001d034713_P002	Maize	plastid	67.05	66.61
KRG97759	Soybean	plastid	63.74	65.36
Bra005864.1-P	Field mustard	plastid	63.58	64.65
KRG97758	Soybean	plastid	58.94	64.61
AT3G55870.3	Thale cress	plastid	63.08	64.47
VIT_13s0067g00400.t01	Wine grape	plastid	61.42	64.3
Bra009130.1-P	Field mustard	plastid	63.41	64.15
PGSC0003DMT400084873	Potato	cytosol	8.44	63.75
AT2G29690.1	Thale cress	plastid	65.07	63.28
PGSC0003DMT400051367	Potato	cytosol, mitochondrion	54.8	61.87
AT5G05730.2	Thale cress	plastid	63.08	61.06
Solyc06g005980.2.1	Tomato	plastid	54.64	56.7
PGSC0003DMT400069076	Potato	cytosol	10.26	50.82
Bra000473.1-P	Field mustard	plastid	65.89	35.19
Zm00001d036484_P001	Maize	mitochondrion	22.68	14.26

Protein Annotations

KEGG:00400+4.1.3.27	KEGG:00405+4.1.3.27	Gene3D:3.60.120.10	MapMan:4.1.5.3.1.1	EntrezGene:606722	InterPro:ADC_synthase
InterPro:Anth_synth_I-like	InterPro:Anth_synth_I_N	InterPro:Anth_synth_I_PabB	UniProt:B4F8P4	EMBL:BT033482	EMBL:BT063227
EMBL:BT063887	EMBL:BT067835	InterPro:Chorismate_C	EMBL:EU963162	GO:GO:0000162	GO:GO:0003674
GO:GO:0003824	GO:GO:0004049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005801	ProteinID:ONL96294.1	PFAM:PF00425	PFAM:PF04715	PRINTS:PR00095	PANTHER:PTHR11236
PANTHER:PTHR11236:SF32	SUPFAM:SSF56322	TIGRFAMs:TIGR00564	UniParc:UPI00016EAEB2	EnsemblPlantsGene:Zm00001d028536	EnsemblPlants:Zm00001d028536_P001
EnsemblPlants:Zm00001d028536_T001	SEG:seg	:	:	:	:

Description

Anthranilate synthase alpha subunit 2 chloroplastic

Coordinates

chr1:-:38520831..38526523

Molecular Weight (calculated)

66672.5 Da

IEP (calculated)

7.287

GRAVY (calculated)

-0.331

Length

604 amino acids

Sequence
(BLAST)

001: MESLAATSVF APSRVAVPAA RALVRAGTVV PTRRTSSRSG TSGVKCSAAV TPQASPVISR SAAAAKAAEE DKRRFFEAAA RGSGKGNLVP MWECIVSDHL
101: TPVLAYRCLV PEDNVDAPSF LFESVEQGPQ GTTNVGRYSM VGAHPVMEIV AKDHKVTIMD HEKSQVTEQV VDDPMQIPRT MMEGWHPQQI DELPESFSGG
201: WVGFFSYDTV RYVEKKKLPF SSAPQDDRNL PDVHLGLYDD VLVFDNVEKK VYVIHWVNVD RHASVEEAYQ DGRSRLNMLL SKVHNSNVPT LSPGFVKLHT
301: RKFGTPLNKS TMTSDEYKNA VLQAKEHIMA GDIFQIVLSQ RFERRTYANP FEVYRALRIV NPSPYMAYVQ ARGCVLVASS PEILTRVSKG KIINRPLAGT
401: VRRGKTEKED QMQEQQLLSD EKQCAEHIML VDLGRNDVGK VSKPGSVKVE KLMNIERYSH VMHISSTVSG QLDDHLQSWD ALRAALPVGT VSGAPKVKAM
501: ELIDKLEVTR RGPYSGGLGG ISFDGDMQIA LSLRTIVFST APSHNTMYSY KDADRRREWV AHLQAGAGIV ADSSPDDEQR ECENKAAALA RAIDLAESAF
601: VDKE

Best Arabidopsis Sequence Match ( AT2G29690.1 )
(BLAST)

001: MSAVSISAVK SDFFTVEAIA VTHHRTPHPP HFPSLRFPLS LKSPPATSLN LVAGSKLLHF SRRLPSIKCS YTPSLDLSEE QFTKFKKASE KGNLVPLFRC
101: VFSDHLTPIL AYRCLVKEDD RDAPSFLFES VEPGSQSSNI GRYSVVGAQP TIEIVAKGNV VTVMDHGASL RTEEEVDDPM MVPQKIMEEW NPQGIDELPE
201: AFCGGWVGYF SYDTVRYVEK KKLPFSNAPE DDRSLPDVNL GLYDDVIVFD HVEKKAYVIH WVRIDKDRSV EENFREGMNR LESLTSRIQD QKPPKMPTGF
301: IKLRTQLFGP KLEKSTMTSE AYKEAVVEAK EHILAGDIFQ IVLSQRFERR TFADPFEIYR ALRIVNPSPY MAYLQVRGCI LVASSPEILL RSKNRKITNR
401: PLAGTVRRGK TPKEDLMLEK ELLSDEKQCA EHIMLVDLGR NDVGKVSKPG SVEVKKLKDI EWFSHVMHIS STVVGELLDH LTSWDALRAV LPVGTVSGAP
501: KVKAMELIDE LEVTRRGPYS GGFGGISFNG DMDIALALRT MVFPTNTRYD TLYSYKHPQR RREWIAHIQA GAGIVADSNP DDEHRECENK AAALARAIDL
601: AESSFLEAPE FTTITPHINN I

Arabidopsis Description

ASA2Anthranilate synthase alpha subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P32069]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.