Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86457 | Canola | cytosol | 89.95 | 89.01 |
| AT3G27960.1 | Thale cress | cytosol | 80.97 | 80.24 |
| VIT_14s0066g01280.t01 | Wine grape | cytosol | 63.62 | 62.39 |
| KRG93305 | Soybean | cytosol | 64.38 | 60.43 |
| KRH56614 | Soybean | cytosol | 63.47 | 59.4 |
| CDX94243 | Canola | cytosol | 24.2 | 58.24 |
| GSMUA_Achr10P... | Banana | cytosol | 55.71 | 55.45 |
| Solyc02g086840.2.1 | Tomato | cytosol | 59.51 | 54.99 |
| EES05647 | Sorghum | cytosol | 59.36 | 54.7 |
| Os02t0708400-01 | Rice | plasma membrane | 59.06 | 54.57 |
| Zm00001d051589_P001 | Maize | cytosol | 58.9 | 54.28 |
| PGSC0003DMT400001405 | Potato | cytosol | 59.06 | 54.19 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 57.84 | 53.67 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 57.84 | 53.6 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 57.84 | 53.52 |
| Zm00001d017793_P001 | Maize | cytosol | 57.84 | 53.3 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 57.53 | 53.24 |
| CDX90092 | Canola | cytosol, mitochondrion | 9.89 | 52.0 |
| CDY05122 | Canola | plastid | 47.95 | 51.89 |
| CDX90788 | Canola | plastid | 47.64 | 51.65 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 55.56 | 51.05 |
| CDY27619 | Canola | nucleus | 49.62 | 49.47 |
| CDY56191 | Canola | cytosol | 50.53 | 46.63 |
| CDY15411 | Canola | mitochondrion | 19.79 | 21.35 |
| CDY19069 | Canola | mitochondrion | 19.33 | 20.62 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | UniProt:A0A078J0A8 | EnsemblPlants:CDY58518 | ProteinID:CDY58518 | ProteinID:CDY58518.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00024807001 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR19959 | PANTHER:PTHR19959:SF160 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI0004EB204A | SEG:seg | : | : | : |
Description
BnaCnng33310DBnaCnng33310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0A8]
Coordinates
chrLK033675:-:43933..46700
Molecular Weight (calculated)
72458.3 Da
IEP (calculated)
4.939
GRAVY (calculated)
-0.386
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGESHDRG KEDSAAVQAS PRSPLSSIDL AMDGAMNASI EQLYHNVCEM ESSDDQSPSR ASFISYGAES RIDLELRHLV GGDVGERKKD VVLEKKEESN
101: EGSKNREGSL SRKKPEKLAK TSPNAKLRIS SRKSPDLRKV SVDEESPELG PLLLKQAREM VSSGENLNRA LDLALRAVKA FEKRAEGELN LVMSLHILAA
201: IYAGLGKYNE AVPVLERSIE IPMIEDGEDH SLAKFAGCMQ LGDMYGLMGQ VENSLLLYTA GLEIQRQVLG ETDPRVGETC RYLAEAHVQA MQFEEASRLC
301: QMALDIHKEN GSTATASIEE AADRKLMGLI CDAKGDYEVA LEHYVLASMA MSSQNHREDV ASIDCSIGDA YMSLARFDES IFAYQKALAV FKQSKGESHS
401: SVASVYVRLA DLYNKIGKLR DSKSYCENAL RIYLKPSPGT PMEEVATGFI EISAIYQSMN ELDQALKLLR RALKIYVNAP GQQNTVAGIE AQMGVISYMM
501: GNYPESYNIF KSAVSKFRNS GEKKTAMFGI ALNQLGLACV QRYAINEAAD LFEEAKGILE NEYGPYHPDT LAVYSNLAGT YDAMGRLEDA IEILEYVVGT
601: REEKLGTANP EVEDEKQRLA ALLKEAGRGR SKRNRALLTL LDKNPEIEPN CGQRPVY
101: EGSKNREGSL SRKKPEKLAK TSPNAKLRIS SRKSPDLRKV SVDEESPELG PLLLKQAREM VSSGENLNRA LDLALRAVKA FEKRAEGELN LVMSLHILAA
201: IYAGLGKYNE AVPVLERSIE IPMIEDGEDH SLAKFAGCMQ LGDMYGLMGQ VENSLLLYTA GLEIQRQVLG ETDPRVGETC RYLAEAHVQA MQFEEASRLC
301: QMALDIHKEN GSTATASIEE AADRKLMGLI CDAKGDYEVA LEHYVLASMA MSSQNHREDV ASIDCSIGDA YMSLARFDES IFAYQKALAV FKQSKGESHS
401: SVASVYVRLA DLYNKIGKLR DSKSYCENAL RIYLKPSPGT PMEEVATGFI EISAIYQSMN ELDQALKLLR RALKIYVNAP GQQNTVAGIE AQMGVISYMM
501: GNYPESYNIF KSAVSKFRNS GEKKTAMFGI ALNQLGLACV QRYAINEAAD LFEEAKGILE NEYGPYHPDT LAVYSNLAGT YDAMGRLEDA IEILEYVVGT
601: REEKLGTANP EVEDEKQRLA ALLKEAGRGR SKRNRALLTL LDKNPEIEPN CGQRPVY
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.