Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92367 | Canola | mitochondrion, plastid | 93.84 | 92.08 |
| AT5G22310.1 | Thale cress | nucleus | 77.07 | 75.47 |
| CDX70996 | Canola | nucleus | 75.37 | 74.74 |
| CDX88802 | Canola | nucleus | 74.1 | 74.57 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 38.0 | 27.45 |
| CDY01038 | Canola | plastid | 34.82 | 26.89 |
| CDY08511 | Canola | plastid | 34.82 | 26.67 |
| KRH25284 | Soybean | plastid | 35.24 | 25.19 |
| Solyc11g068720.1.1 | Tomato | nucleus | 33.33 | 24.76 |
| KRH30384 | Soybean | plastid | 34.39 | 24.47 |
| PGSC0003DMT400067737 | Potato | nucleus | 28.66 | 23.64 |
| Os02t0506100-00 | Rice | plastid | 21.66 | 23.39 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 26.75 | 22.26 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 26.54 | 22.08 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 26.11 | 22.08 |
| Solyc06g074190.2.1 | Tomato | nucleus | 25.27 | 21.96 |
| CDX73866 | Canola | cytosol | 17.2 | 21.95 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 28.66 | 21.88 |
| CDY56601 | Canola | cytosol, golgi, plastid | 16.99 | 21.68 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 26.33 | 21.42 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 26.11 | 21.28 |
| EES11990 | Sorghum | nucleus | 25.48 | 21.13 |
| CDX80001 | Canola | nucleus | 14.86 | 21.08 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 25.9 | 21.07 |
| Zm00001d003996_P001 | Maize | nucleus | 25.27 | 20.91 |
| PGSC0003DMT400015076 | Potato | nucleus | 25.27 | 20.91 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 22.51 | 20.83 |
| Os04t0382800-00 | Rice | nucleus | 24.63 | 20.32 |
| Zm00001d025208_P002 | Maize | nucleus | 24.84 | 19.97 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 22.51 | 18.5 |
| KXG30263 | Sorghum | mitochondrion | 23.78 | 18.01 |
| Zm00001d000402_P001 | Maize | mitochondrion | 19.96 | 17.15 |
| CDY42023 | Canola | nucleus | 15.07 | 16.99 |
| CDY25566 | Canola | nucleus | 19.53 | 15.89 |
| CDY34403 | Canola | nucleus | 18.9 | 15.48 |
| CDY37111 | Canola | nucleus | 22.29 | 15.46 |
| CDY22812 | Canola | nucleus | 21.23 | 15.15 |
| CDY29821 | Canola | mitochondrion | 20.38 | 15.02 |
| CDY39728 | Canola | nucleus | 18.68 | 14.77 |
| CDY25414 | Canola | mitochondrion | 19.96 | 14.76 |
| CDY44461 | Canola | nucleus | 18.26 | 14.26 |
| CDX80002 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY67997 | EnsemblPlantsGene:GSBRNA2T00068400001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF16 | ProteinID:CDY67997 |
| ProteinID:CDY67997.1 | SEG:seg | UniParc:UPI0004EED52B | UniProt:A0A078JRE5 | MapMan:35.2 | : |
Description
BnaCnng57260DBnaCnng57260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRE5]
Coordinates
chrLK036742:+:2638..4236
Molecular Weight (calculated)
54066.0 Da
IEP (calculated)
8.361
GRAVY (calculated)
-1.005
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRKRGCKIR KRGCSSSSSS SLARRNRFKR AIFAGKRASL EDGGGSGTPV KSITAAKPPV LLPFSPENPP VCQSQKRCVS ARKLAATLWE ISDGNTEPPV
101: SNEDCLKNKK PPRNRRKTST EIPFPDFPLK SSHPVSHERI LLQDDDTFRR RSKIPQKLQL IEYKTIGTNS VKTRFKNVSE GLTTSKELVK VLKRISHLGD
201: DHKNASNRLI SALAYELNRA RSSLKHLMSE FNAEEEEKRR LVEKLQEEAV AERKLRLTTE KMNRRLLREL AEAKETERKM KEEMEREKRA KDVLEEVCDE
301: LARGIGDDKK EMEKEREMMH IADVLREERV QMKLTEARHE FEEKHAAVER QKKELRRVVD GQEEKGSSEI LRVLEMLDGS DDDDDEEEEE EESDLKSIEL
401: NMESGSKWGY VESRRDGRRE SRFVGSGEDD DDHVEKRSVI VDNGARDESL KTLREYIVSN VRFIGSSSAL T
101: SNEDCLKNKK PPRNRRKTST EIPFPDFPLK SSHPVSHERI LLQDDDTFRR RSKIPQKLQL IEYKTIGTNS VKTRFKNVSE GLTTSKELVK VLKRISHLGD
201: DHKNASNRLI SALAYELNRA RSSLKHLMSE FNAEEEEKRR LVEKLQEEAV AERKLRLTTE KMNRRLLREL AEAKETERKM KEEMEREKRA KDVLEEVCDE
301: LARGIGDDKK EMEKEREMMH IADVLREERV QMKLTEARHE FEEKHAAVER QKKELRRVVD GQEEKGSSEI LRVLEMLDGS DDDDDEEEEE EESDLKSIEL
401: NMESGSKWGY VESRRDGRRE SRFVGSGEDD DDHVEKRSVI VDNGARDESL KTLREYIVSN VRFIGSSSAL T
001: MEQRKKGCKI RKRGGSSSSS SSLARRNRFK RAIFAGKRAA QDDGGSGTPV KSITAAKTPV LLSFSPENLP IDHHQLQKSC VSARKLAATL WEINDDADPP
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
Arabidopsis Description
AT5g22310/MWD9_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.