Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39728 | Canola | nucleus | 96.02 | 97.15 |
| AT5G41620.1 | Thale cress | nucleus | 78.11 | 75.6 |
| CDY34403 | Canola | nucleus | 56.55 | 59.3 |
| CDY25566 | Canola | nucleus | 56.22 | 58.55 |
| KRH77618 | Soybean | nucleus | 50.58 | 45.8 |
| KRH27868 | Soybean | nucleus | 49.09 | 44.25 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 47.26 | 41.85 |
| PGSC0003DMT400032084 | Potato | nucleus | 44.94 | 39.97 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 44.78 | 39.82 |
| CDX80001 | Canola | nucleus | 20.4 | 37.05 |
| CDY42023 | Canola | nucleus | 22.72 | 32.78 |
| GSMUA_Achr10P... | Banana | nucleus | 35.16 | 31.45 |
| Os02t0260500-00 | Rice | nucleus | 25.87 | 31.39 |
| GSMUA_Achr10P... | Banana | nucleus | 33.0 | 30.2 |
| Zm00001d053356_P002 | Maize | nucleus | 28.19 | 26.81 |
| KXG29970 | Sorghum | nucleus | 30.85 | 26.57 |
| OQU76466 | Sorghum | nucleus | 30.85 | 26.09 |
| Zm00001d037050_P001 | Maize | nucleus | 27.03 | 24.62 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 30.02 | 24.13 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 29.68 | 24.06 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 29.35 | 23.6 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 29.52 | 21.17 |
| CDX70996 | Canola | nucleus | 16.25 | 20.63 |
| CDX88802 | Canola | nucleus | 15.75 | 20.3 |
| CDY01038 | Canola | plastid | 20.4 | 20.16 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 10.95 | 20.06 |
| CDY08511 | Canola | plastid | 20.4 | 20.0 |
| CDY56601 | Canola | cytosol, golgi, plastid | 11.77 | 19.24 |
| CDX73866 | Canola | cytosol | 11.77 | 19.24 |
| CDX92367 | Canola | mitochondrion, plastid | 15.09 | 18.96 |
| CDY67997 | Canola | mitochondrion, plastid | 14.26 | 18.26 |
| CDX80002 | Canola | cytosol | 1.33 | 17.39 |
| CDY37111 | Canola | nucleus | 18.41 | 16.35 |
| CDY22812 | Canola | nucleus | 16.75 | 15.3 |
| CDY25414 | Canola | mitochondrion | 14.93 | 14.13 |
| CDY29821 | Canola | mitochondrion | 14.93 | 14.08 |
Protein Annotations
| EnsemblPlants:CDY44461 | EnsemblPlantsGene:GSBRNA2T00080176001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF9 | ProteinID:CDY44461 |
| ProteinID:CDY44461.1 | SEG:seg | UniParc:UPI0004EF02D3 | UniProt:A0A078I3N5 | MapMan:35.1 | : |
Description
BnaCnng11140DBnaCnng11140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3N5]
Coordinates
chrLK032590:-:99752..102179
Molecular Weight (calculated)
68095.0 Da
IEP (calculated)
8.768
GRAVY (calculated)
-0.925
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKVTGGEE ERGERQKVER LVEKLKNYTT TTKNNNNGDG PSTPVHVSFS GSSKLFSPSD VVSSRKLAAA FWEFHHYYCY QEEDRSFFSP PPAAAEMHRR
101: QRHGKAVVKE NGLDLSQFLR DPSPDHQPES AGSLRRQIGQ VLMKHHQSLE RNNHALQPVS PASYGSSLEV APYNKAVTPS SSLEFRGRQS REPQYNLKTS
201: TELLKVVNRI WSLEEQHAAN ISLIKSLKTE LAHSRVRIKE LLRYQQADRH ELNGVVKQLA GENLSRKNKE VERIQCVRKE LEDERKLRKR SESMQRKLAR
301: ELSEVKSSLS ECVKEVERGN KSKKMVEILC DEFAKGIKSY EEEFHGLKHK NGAGRVERDQ MVLHIAESWL DERMQMRLEG GDGSVLDKLG VEIETFLQAK
401: RRSSLESVPF NALSAPPRDV ECEEDSGASD SNCFELKKPV ESHVNETEKL NQTNKDDENP KGMIGSPSSF QVKFEDQMAW AMSSNGKKKT KTIKEEEDDA
501: EPEKNNGNKQ ENETTSKNDV MGEMIRTHGR LLSETGEASC SSYPSSWRQA SPVRQWTSRT VTGELLGSSE TSAAIGIAQG VKDNTLKTKL AKSSKSRLRL
601: FKG
101: QRHGKAVVKE NGLDLSQFLR DPSPDHQPES AGSLRRQIGQ VLMKHHQSLE RNNHALQPVS PASYGSSLEV APYNKAVTPS SSLEFRGRQS REPQYNLKTS
201: TELLKVVNRI WSLEEQHAAN ISLIKSLKTE LAHSRVRIKE LLRYQQADRH ELNGVVKQLA GENLSRKNKE VERIQCVRKE LEDERKLRKR SESMQRKLAR
301: ELSEVKSSLS ECVKEVERGN KSKKMVEILC DEFAKGIKSY EEEFHGLKHK NGAGRVERDQ MVLHIAESWL DERMQMRLEG GDGSVLDKLG VEIETFLQAK
401: RRSSLESVPF NALSAPPRDV ECEEDSGASD SNCFELKKPV ESHVNETEKL NQTNKDDENP KGMIGSPSSF QVKFEDQMAW AMSSNGKKKT KTIKEEEDDA
501: EPEKNNGNKQ ENETTSKNDV MGEMIRTHGR LLSETGEASC SSYPSSWRQA SPVRQWTSRT VTGELLGSSE TSAAIGIAQG VKDNTLKTKL AKSSKSRLRL
601: FKG
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.