Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 95.58 | 95.58 |
| KRH77618 | Soybean | nucleus | 54.42 | 55.41 |
| KRH27868 | Soybean | nucleus | 53.39 | 54.11 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 54.13 | 53.89 |
| Bra025484.1-P | Field mustard | nucleus | 40.41 | 46.05 |
| CDY39728 | Canola | nucleus | 39.97 | 45.47 |
| AT5G41620.1 | Thale cress | nucleus | 41.3 | 44.94 |
| CDY44461 | Canola | nucleus | 39.97 | 44.94 |
| CDY34403 | Canola | nucleus | 37.02 | 43.65 |
| Bra027683.1-P | Field mustard | nucleus | 36.28 | 42.71 |
| CDY25566 | Canola | nucleus | 36.14 | 42.31 |
| AT1G64180.1 | Thale cress | nucleus | 35.84 | 40.98 |
| GSMUA_Achr10P... | Banana | nucleus | 38.35 | 38.58 |
| GSMUA_Achr10P... | Banana | nucleus | 36.28 | 37.33 |
| PGSC0003DMT400000259 | Potato | nucleus | 35.84 | 37.21 |
| Os02t0260500-00 | Rice | nucleus | 26.7 | 36.42 |
| OQU76466 | Sorghum | nucleus | 34.22 | 32.54 |
| Zm00001d037050_P001 | Maize | nucleus | 30.53 | 31.27 |
| KXG29970 | Sorghum | nucleus | 30.97 | 30.0 |
| Zm00001d053356_P002 | Maize | nucleus | 27.88 | 29.81 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 32.15 | 29.07 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 31.71 | 28.9 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 31.71 | 28.67 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 32.3 | 26.04 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 12.54 | 25.84 |
| PGSC0003DMT400072353 | Potato | plastid | 21.53 | 22.29 |
| PGSC0003DMT400067737 | Potato | nucleus | 17.99 | 21.37 |
| PGSC0003DMT400015076 | Potato | nucleus | 17.4 | 20.74 |
| PGSC0003DMT400071667 | Potato | nucleus | 16.52 | 16.45 |
| PGSC0003DMT400057488 | Potato | nucleus | 16.08 | 15.75 |
| PGSC0003DMT400042430 | Potato | nucleus | 14.45 | 15.61 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400032084 | EnsemblPlantsGene:PGSC0003DMG400012313 | EntrezGene:102603134 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF9 |
| PGSC:PGSC0003DMG400012313 | RefSeq:XP_006343905.1 | SEG:seg | UniParc:UPI0002959E97 | UniProt:M1AWU0 | MapMan:35.1 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012313]
Coordinates
chr8:+:55486901..55491435
Molecular Weight (calculated)
77307.6 Da
IEP (calculated)
7.662
GRAVY (calculated)
-0.960
Length
678 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSGEGTAEK QENLGEKLKK IGKRGGHTTP VIPFLRLQHN HQESVVCVVQ ESHIKETPFQ NSCVSARKLA AILWELHQYK IPFSEMHHVN SNNVPSSRIR
101: RLQPYRHHRH HLYEDSRVLE HPDPSPSSPD LPGSAGSLRR HVAASLMQHH RSIERTNHAI QPVSPASYGS SMEIAPYNAA VTPSSSIDLK GRIGETSYSL
201: KTSTELLKVL NRIWGLEEQH ASNMSLVKAL KKELDHARVR IKELVRDQQV DRHEIDELMK QITEDKVVRK SKEQDRISAA VQSVRDELED ERKLRKRSES
301: LHRRLARELY EVKTSLANAS KEWDKEKKSR QLLEDLCDEF AWGIRHYEQE LHSVRHKSDK DWTERTNSDQ LILHISEAWI DERMQTNMEP QYGQGDKSSI
401: IEKFRSEIET FIKTKQTGIK NNVNLGDPTY RRGSLDSIPL NVAGSAPQDE GDDEDSVSSD SHCFELQKPS ASDLRPRENG AKEKSAEETM RPNYILRKPA
501: LHERSKSSSM SNLQVKFEEQ MNRAALPSES RNEFDDNDLG ETSEKNQVEI STSNKFEICE VTEEGSSGKK NKADGTPGVN SNYMIDELIR SHYLLSDSGN
601: MPPENDYELA SYGTSVRRAQ ASPVRQWTEK LPSHENISES STKLPPDLKE NTLKAKLMEA RTRGQRSRSR LKGTKISL
101: RLQPYRHHRH HLYEDSRVLE HPDPSPSSPD LPGSAGSLRR HVAASLMQHH RSIERTNHAI QPVSPASYGS SMEIAPYNAA VTPSSSIDLK GRIGETSYSL
201: KTSTELLKVL NRIWGLEEQH ASNMSLVKAL KKELDHARVR IKELVRDQQV DRHEIDELMK QITEDKVVRK SKEQDRISAA VQSVRDELED ERKLRKRSES
301: LHRRLARELY EVKTSLANAS KEWDKEKKSR QLLEDLCDEF AWGIRHYEQE LHSVRHKSDK DWTERTNSDQ LILHISEAWI DERMQTNMEP QYGQGDKSSI
401: IEKFRSEIET FIKTKQTGIK NNVNLGDPTY RRGSLDSIPL NVAGSAPQDE GDDEDSVSSD SHCFELQKPS ASDLRPRENG AKEKSAEETM RPNYILRKPA
501: LHERSKSSSM SNLQVKFEEQ MNRAALPSES RNEFDDNDLG ETSEKNQVEI STSNKFEICE VTEEGSSGKK NKADGTPGVN SNYMIDELIR SHYLLSDSGN
601: MPPENDYELA SYGTSVRRAQ ASPVRQWTEK LPSHENISES STKLPPDLKE NTLKAKLMEA RTRGQRSRSR LKGTKISL
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.