CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037050_P001	Maize	nucleus	85.27	91.84
Os06t0507900-01	Rice	cytosol, nucleus	30.01	65.05
TraesCS7A01G344200.1	Wheat	nucleus	65.5	62.27
TraesCS7D01G335400.1	Wheat	nucleus	64.94	62.23
TraesCS7B01G238900.1	Wheat	nucleus	65.08	61.87
HORVU7Hr1G080670.9	Barley	nucleus, plastid	65.22	55.29
KXG29970	Sorghum	nucleus	49.93	50.86
GSMUA_Achr10P...	Banana	nucleus	38.57	41.73
GSMUA_Achr10P...	Banana	nucleus	38.71	40.95
VIT_15s0046g01530.t01	Wine grape	mitochondrion	34.5	37.33
KRH27868	Soybean	nucleus	33.52	35.73
KRH77618	Soybean	nucleus	32.82	35.14
Solyc08g081830.2.1	Tomato	nucleus, plastid	32.82	34.51
PGSC0003DMT400032084	Potato	nucleus	32.54	34.22
VIT_02s0025g00840.t01	Wine grape	nucleus	32.68	34.21
KRH47994	Soybean	nucleus	31.0	33.69
KRH06548	Soybean	nucleus	30.72	33.23
CDY34403	Canola	nucleus	26.23	32.52
Bra027683.1-P	Field mustard	nucleus	26.09	32.29
CDY25566	Canola	nucleus	25.81	31.78
Bra025484.1-P	Field mustard	nucleus	26.37	31.6
CDY39728	Canola	nucleus	26.23	31.38
PGSC0003DMT400000259	Potato	nucleus	28.47	31.09
CDY44461	Canola	nucleus	26.09	30.85
Solyc01g095390.2.1	Tomato	nucleus	24.54	30.7
AT1G64180.1	Thale cress	nucleus	25.39	30.52
AT5G41620.1	Thale cress	nucleus	26.51	30.34
KRG97105	Soybean	nucleus	26.79	29.7
KRH68854	Soybean	nucleus	24.4	29.34
EES11990	Sorghum	nucleus	14.87	18.66
EES19759	Sorghum	plastid	16.13	17.22
KXG30263	Sorghum	mitochondrion	14.59	16.72
OQU80028	Sorghum	plastid	15.01	16.21
EES01592	Sorghum	plastid	14.87	15.68
EER97816	Sorghum	mitochondrion, plastid	12.9	15.46
EES12886	Sorghum	plastid	14.87	15.32

Protein Annotations

EnsemblPlants:OQU76466	EnsemblPlantsGene:SORBI_3010G149600	EntrezGene:8058829	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF4
ProteinID:EER89831.1	ProteinID:OQU76466	ProteinID:OQU76466.1	ProteinID:OQU76468.1	RefSeq:XP_002438464.1	SEG:seg
UniParc:UPI0001A89751	UniProt:C5Z3I9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:43036399..43042747

Molecular Weight (calculated)

78971.9 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.872

Length

713 amino acids

Sequence
(BLAST)

001: MEVEPPPAAA AAVGAALLKC RGNGAGGEPT VEAFGKAGSR SPSRAAPRGP PQEPNGTPGP SHRRGEEEEE EPLRRGLAAA QARARARRKA GHATPSPSWK
101: LEPSPPRPED EALAEADSGA GRRGAPAASA RQLGATLWEI QDVIRAAGAG RRIRRRGRRA PTADDASADA DRPRSSGGFG AQIAASVIEH EKLHEERCHS
201: RQPLSPASYT SSVGATTINL ISPTRSLDCN ARFRQPGNDI KTSTELLKVL NRIWSLEEQH AADVSAMKGL KRELHHAQAC IQELMQERQR YHHEIDSLAR
301: QVTEDKMARR SKDQEKMRAA LRSLQEELED ERRLRKHSET LHRKLGKELS EMKSAFCKAV KALEKEKKTT CLLEDLCDEF AKGIRNYEEE VRLLKQKHVK
401: EYEHKFDKSV VHISEAWLDE RMQMHKTNMR ADLSGKTSIT ERLSSEIEGF LHHAKGLGYT KNDNLDNGNE KRDASLCRQS LESVHLNGAT SAPQLAEDDD
501: GSSIASDLHC FELNMHGGAI RNHDLAGTRR RVTGCMHSPM RRLEYSNGIS VEGSPMSNAP PCPKKEKTRS SVSRQQFITS TPEISSRNDA SLAPADEQNE
601: TVMTQVSRRL RDDLLKIKSE APQHAYLGQK SNQPRTNQFH ESTSRDLCDV RSPARHLNNP AQSLGYETSE PPAHQLIGTK ENTLKAKLLQ ARLEGQHARL
701: SASVFPLIST RRK

Best Arabidopsis Sequence Match ( AT1G64180.1 )
(BLAST)

001: MKSKEEEEEE EEEDDGGEGQ KGKRFIEKLR RRAVFVGHRS VFRRPSTPVH ISFNPNKNPS SASSRKLAAS LWEFYQYYDN DHLIHPPAAT KMHRAPLGSA
101: GPSNSRRLRH GHGKAAVADN NGIELTDHQP ESAGSIRRQI GQMLMKHHHL TERNDHALQP VSPTSYDSSL EFRGRRRAGE PNNNIKTSTE LLKVLNRIWI
201: LEEQHSANIS LIKSLKTELA HSRARIKDLL RCKQADKRDM DDFVKQLAEE KLSKGTKEHD RLSSAVQSLE DERKLRKRSE SLYRKLAQEL SEVKSTLSNC
301: VKEMERGTES KKILERLCDE FAKGIKSYER EIHGLKQKLD KNWKGWDEQD HMILCIAESW LDERIQSGNG SALEKLEFEI ETFLKTNQNA DSNEIARNRR
401: TSLESVPFNA MSAPIWEVDR EEEEDSGGSG SNCFELKKHG SDVAKPPRGD ETEKPELIKV GVSERPQRRS QSPSSLQVKF EDQMAWAMSS NEKKKTRANE
501: MEPETEKCGK ETNNVVGEMI RTHRRLSSET REIDEASCSY PSRRRESPIR QWNTRTVTPD LGAPRGVKDN TLKTKLSEAR TTSSRPRVRL FKD

Arabidopsis Description

Intracellular protein transport protein USO1-like protein [Source:UniProtKB/TrEMBL;Acc:F4I5B1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.