CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043218_P001	Maize	plastid	88.17	88.56
Zm00001d012593_P001	Maize	plastid	76.04	85.81
EES19759	Sorghum	plastid	60.5	61.23
GSMUA_Achr6P00380_001	Banana	nucleus	29.88	47.2
GSMUA_Achr7P00230_001	Banana	nucleus	32.25	44.22
GSMUA_Achr2P03040_001	Banana	nucleus	29.44	43.45
VIT_19s0090g00370.t01	Wine grape	plastid	41.42	39.05
KRH73733	Soybean	nucleus	39.5	38.64
KRH14411	Soybean	nucleus	39.35	38.55
Solyc07g064580.2.1	Tomato	nucleus	38.02	38.19
CDY37111	Canola	nucleus	38.31	38.14
Bra018866.1-P	Field mustard	nucleus	37.87	38.04
KRH46168	Soybean	nucleus	39.2	37.91
CDY22812	Canola	nucleus	36.69	37.58
EES12886	Sorghum	plastid	38.31	37.43
KRG98777	Soybean	nucleus	38.46	37.2
KRH20862	Soybean	cytosol	14.79	37.17
PGSC0003DMT400057488	Potato	nucleus	37.87	36.99
AT1G50660.1	Thale cress	nucleus	39.65	36.97
PGSC0003DMT400071667	Potato	nucleus	36.54	36.27
Solyc12g005010.1.1	Tomato	nucleus	35.95	36.21
OQU80028	Sorghum	plastid	35.21	36.06
VIT_10s0116g01830.t01	Wine grape	nucleus	39.2	35.96
CDY29821	Canola	mitochondrion	33.43	35.37
AT3G20350.1	Thale cress	plastid	35.21	35.36
CDY25414	Canola	mitochondrion	33.14	35.16
Bra035788.1-P	Field mustard	mitochondrion	33.14	35.16
PGSC0003DMT400042430	Potato	nucleus	29.29	31.53
Solyc02g080520.2.1	Tomato	nucleus	29.14	31.12
KRH02074	Soybean	plastid	19.23	30.66
KRH11424	Soybean	nucleus, plastid	17.46	30.65
KRH51081	Soybean	plastid	20.12	30.43
GSMUA_Achr4P23750_001	Banana	cytosol	17.46	28.92
EER97816	Sorghum	mitochondrion, plastid	24.56	27.9
KRH11499	Soybean	plastid	25.15	25.3
KRH36516	Soybean	plastid	21.6	25.0
EES11990	Sorghum	nucleus	16.27	19.37
KXG30263	Sorghum	mitochondrion	17.6	19.13
OQU76466	Sorghum	nucleus	15.68	14.87
KXG29970	Sorghum	nucleus	15.24	14.71

Protein Annotations

EnsemblPlants:EES01592	EnsemblPlantsGene:SORBI_3003G323300	EntrezGene:8082388	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF31
ProteinID:EES01592	ProteinID:EES01592.1	RefSeq:XP_002456472.1	SEG:seg	unigene:Sbi.21137	UniParc:UPI0001A8441E
UniProt:C5XMD9	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:64993684..64997318

Molecular Weight (calculated)

75925.5 Da

IEP (calculated)

9.194

GRAVY (calculated)

-0.948

Length

676 amino acids

Sequence
(BLAST)

001: MARPGSRRAR RPPPPASPEP RAAAATPPRP GSASRRRARR VRVQSPSLAA VRRGPAPPPP PHPPPDTPPV RWPLGAGARS ASRPGAGAVA LSVREIAAAL
101: WRMQPPQAPP PPPGPGTGTG TARRSRAQSS SKRPHTPDHC QQYKAVIQGR TGNRTVSNIP HEIEAHSAVR QIETEMATKW NHQFMKASQG ADYGYIEHNQ
201: RDAGGEIYSL REELMVAQDR IHQLEAECRS TKKQLDHLVK NIAGEKASFK SREHDKFHHI LDAVKEELNR ERKQRQQAEM MNSKLHNDLS EMKFVAKRHL
301: QDYEKERKAR MLMEEVCDEL AKEIAEDKAE VEAMRSESMK MRDELEEEKK MLQMAEVWRE ERVQMKLVDA KLTLENKYSQ LSKLQNELED FLYSQPGCNM
401: EKGTVREAER LKEAICFSMI NGIKEFSYKP PPPSEDIFAV FEELKQREDT AEKVIVQCNG NRPKSRASRA HTASPETNMF LENPPSRYRN QPFTRNETAE
501: DDSGWETVSE VEENGNSPGG SEPSVNGFCG ENGASVSGTD WDENCDNDQA RSEISEVCST TAGRSRNKRS FVGLWRSSNT VDIKKMGSNT LNGRSSNARM
601: SNVTESPDLK NSEVCDSPHI TGQWRPDLLN PDIVRAIKGC IDWPRGVQKH SLKSKILEAR IDGSKVQLRQ ALKQKI

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.