CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026344_P001	Maize	plastid	92.05	92.72
Zm00001d002252_P001	Maize	plastid	91.33	92.13
Os04t0625000-01	Rice	nucleus	84.68	84.2
TraesCS2B01G492000.1	Wheat	plastid	80.2	81.02
TraesCS2D01G469200.1	Wheat	plastid	80.35	80.46
TraesCS2A01G469100.1	Wheat	plastid	80.35	80.23
OQU80028	Sorghum	plastid	61.56	64.55
GSMUA_Achr6P00380_001	Banana	nucleus	30.35	49.07
GSMUA_Achr7P00230_001	Banana	nucleus	34.1	47.87
Solyc07g064580.2.1	Tomato	nucleus	43.5	44.73
PGSC0003DMT400057488	Potato	nucleus	43.64	43.64
KRH46168	Soybean	nucleus	43.21	42.78
KRH14411	Soybean	nucleus	42.49	42.61
GSMUA_Achr2P03040_001	Banana	nucleus	28.18	42.58
VIT_19s0090g00370.t01	Wine grape	plastid	43.79	42.26
KRH73733	Soybean	nucleus	42.2	42.26
Bra018866.1-P	Field mustard	nucleus	41.04	42.2
KRG98777	Soybean	nucleus	42.34	41.92
CDY22812	Canola	nucleus	39.74	41.67
CDY37111	Canola	nucleus	40.75	41.53
EES19759	Sorghum	plastid	39.31	40.72
Bra035788.1-P	Field mustard	mitochondrion	37.14	40.35
CDY25414	Canola	mitochondrion	37.14	40.35
PGSC0003DMT400071667	Potato	nucleus	39.6	40.23
Solyc12g005010.1.1	Tomato	nucleus	38.44	39.64
CDY29821	Canola	mitochondrion	36.56	39.59
AT3G20350.1	Thale cress	plastid	38.29	39.38
AT1G50660.1	Thale cress	nucleus	40.9	39.03
VIT_10s0116g01830.t01	Wine grape	nucleus	41.33	38.81
EES01592	Sorghum	plastid	37.43	38.31
KRH20862	Soybean	cytosol	14.45	37.17
Solyc02g080520.2.1	Tomato	nucleus	31.36	34.28
PGSC0003DMT400042430	Potato	nucleus	30.92	34.08
KRH11424	Soybean	nucleus, plastid	18.06	32.47
KRH02074	Soybean	plastid	19.22	31.37
KRH51081	Soybean	plastid	20.23	31.32
GSMUA_Achr4P23750_001	Banana	cytosol	18.06	30.64
EER97816	Sorghum	mitochondrion, plastid	26.16	30.42
KRH11499	Soybean	plastid	25.87	26.64
KRH36516	Soybean	plastid	22.4	26.54
EES11990	Sorghum	nucleus	16.62	20.25
KXG30263	Sorghum	mitochondrion	16.33	18.17
KXG29970	Sorghum	nucleus	17.2	17.0
OQU76466	Sorghum	nucleus	15.32	14.87

Protein Annotations

EnsemblPlants:EES12886	EnsemblPlantsGene:SORBI_3006G221300	EntrezGene:8066809	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF12
ProteinID:EES12886	ProteinID:EES12886.1	RefSeq:XP_002448558.1	SEG:seg	unigene:Sbi.16682	UniParc:UPI0001A876AB
UniProt:C5YG71	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:56801263..56805484

Molecular Weight (calculated)

77530.8 Da

IEP (calculated)

8.014

GRAVY (calculated)

-0.783

Length

692 amino acids

Sequence
(BLAST)

001: MSSRNRSAAA ASCAAPAAAP SLRTPRRLKR RPVKSPAGAP GGGRRSGPAT PLLKWDVGGG GRGEGRKGAG AADEAGDAAR ARETKAREVS VRRLAAGVWR
101: LRPPEAVAGG GGESRVRVGV EHIPRHLQVQ LLKQNTSGHH QSLKNEVSSP ISVLERKSGE LHKVQLHATS AMLPVTTMEK ATKWEPGDIK GMESHDAYLI
201: ASQLNLLNEQ QDTAYVANLQ MELQQARDRI SELETERRSA KKKLDHLFKK LAEEKAAWRN REHEKVRAIL EDMKADLDHE KKNRRRLEMI NLKLVNELKE
301: AKMSAKQLLQ EYDTERKARE LTEEVCNELA REVEEDKAEI EALKQDSLRL REEVDEERKM LQMAEVWREE RVQMKLVDAK LTLDAKYTQL SKLQQDVEAF
401: IAACSTANAD ITAVEEAENI IQAIKSVRAQ DAEFRYEPPV ASEDIFSIFE ELRPSEEPVI KEIEPCYKNS SAKCESEIQE VSPMTDIFLE KKAKVYSNKS
501: PKDESVTEDG SSWETISHED MQGSSGSPDG SEPSVSNKIC DGSISWKSRN GFEYMENEKL KDDLADAYLT NMNQPKKKES AISKLWKSSR PKNSEICKKD
601: AVETVNARSS NVRLSVGTYS TVESGIQEIG LSPPSVEQWS SPDSMNIQFN RGFKGCIEYP RTSQKHSLKA KLMEARMESQ KVQLRQVLKQ KI

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.