Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G492000.1 | Wheat | plastid | 97.4 | 98.25 |
| TraesCS2A01G469100.1 | Wheat | plastid | 97.25 | 96.97 |
| EES12886 | Sorghum | plastid | 80.46 | 80.35 |
| Os04t0625000-01 | Rice | nucleus | 79.88 | 79.31 |
| Zm00001d026344_P001 | Maize | plastid | 78.0 | 78.46 |
| Zm00001d002252_P001 | Maize | plastid | 76.41 | 76.97 |
| TraesCS7D01G288600.1 | Wheat | plastid | 49.64 | 53.34 |
| GSMUA_Achr6P00380_001 | Banana | nucleus | 28.51 | 46.03 |
| GSMUA_Achr7P00230_001 | Banana | nucleus | 32.13 | 45.03 |
| Solyc07g064580.2.1 | Tomato | nucleus | 41.39 | 42.5 |
| PGSC0003DMT400057488 | Potato | nucleus | 41.39 | 41.33 |
| GSMUA_Achr2P03040_001 | Banana | nucleus | 27.35 | 41.27 |
| VIT_19s0090g00370.t01 | Wine grape | plastid | 42.11 | 40.59 |
| KRH14411 | Soybean | nucleus | 39.51 | 39.57 |
| Bra018866.1-P | Field mustard | nucleus | 38.35 | 39.38 |
| CDY37111 | Canola | nucleus | 38.64 | 39.32 |
| KRH46168 | Soybean | nucleus | 39.65 | 39.2 |
| TraesCS1D01G317000.1 | Wheat | nucleus, plastid | 36.9 | 38.81 |
| CDY22812 | Canola | nucleus | 37.05 | 38.79 |
| KRH73733 | Soybean | nucleus | 38.78 | 38.78 |
| KRG98777 | Soybean | nucleus | 39.22 | 38.77 |
| PGSC0003DMT400071667 | Potato | nucleus | 38.06 | 38.62 |
| Bra035788.1-P | Field mustard | mitochondrion | 35.46 | 38.46 |
| CDY25414 | Canola | mitochondrion | 35.46 | 38.46 |
| Solyc12g005010.1.1 | Tomato | nucleus | 37.34 | 38.45 |
| AT3G20350.1 | Thale cress | plastid | 37.05 | 38.04 |
| CDY29821 | Canola | mitochondrion | 35.02 | 37.87 |
| VIT_10s0116g01830.t01 | Wine grape | nucleus | 39.65 | 37.18 |
| AT1G50660.1 | Thale cress | nucleus | 38.64 | 36.83 |
| KRH20862 | Soybean | cytosol | 14.18 | 36.43 |
| PGSC0003DMT400042430 | Potato | nucleus | 29.52 | 32.48 |
| Solyc02g080520.2.1 | Tomato | nucleus | 29.67 | 32.39 |
| KRH11424 | Soybean | nucleus, plastid | 17.22 | 30.91 |
| KRH51081 | Soybean | plastid | 19.68 | 30.43 |
| KRH02074 | Soybean | plastid | 18.38 | 29.95 |
| GSMUA_Achr4P23750_001 | Banana | cytosol | 17.22 | 29.17 |
| KRH36516 | Soybean | plastid | 21.56 | 25.51 |
| KRH11499 | Soybean | plastid | 24.46 | 25.15 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 17.37 | 21.2 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 15.34 | 18.31 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 15.05 | 13.98 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G469200.1 | EnsemblPlantsGene:TraesCS2D01G469200 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF12 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:574351155..574354797
Molecular Weight (calculated)
77629.8 Da
IEP (calculated)
7.166
GRAVY (calculated)
-0.821
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRNRSAAP AAAPTVPSLR TPRRLRRRPL RAPGSGGGRR SGPATPLLRW DAGVANGAPD KRGEKPGAGP GPGPREKARD VSVRRLAAGV WRLRPPEAVV
101: GGHGGGGGGG GEGRVHVGLE HIPRHLQVQL LKQDTLGHHQ SLKNEISSPI SVLERKSEEL HKVQFHGSSP MIPVTTMEKA TKWEPENMKG MESHDAYLIA
201: SQLNLLDEQQ DASYVANLQL ELRQARDRVG ELESERRSTK KKLDHLFKKL AEEKAAWRSR EHEKMRAVLE DMKANLDHEK KNRRRLELIN MKLVNELKET
301: KMSANQLVQE YDEERKTREL TEEVCNELAR EVEEDKAEIE ALKHDIQKLR EEVDEERKML QMAEVWREER VQMKLVDAKL TLDAKYTELS RLQQDVEAFV
401: AGCSSARGDI TVVEQAENII HAIKSVRAQD VEFRYEPPAE SEDIFSIFEE LRPSEEPVIK DIEQCYKNSS IVCESEIQEA SPMTDIFLEK PAKAAYSNKN
501: PHNESEAGDA SSWETISHED MQGSSGSPDG SQSSINKIFD GSISWTSRND FEYGEIEKLK DDLADAYLMT MTQPKKKESA ISKLWKSSRP KNSDVSKKDA
601: TEALNGRSSN VRLSVGTHST IESGVQDIGL SSPSVGQWSS PDSMNIQFNR GFRGCMEYPR ASQKHSLKEK LMEARMVSQK VQLRQVLKQK I
101: GGHGGGGGGG GEGRVHVGLE HIPRHLQVQL LKQDTLGHHQ SLKNEISSPI SVLERKSEEL HKVQFHGSSP MIPVTTMEKA TKWEPENMKG MESHDAYLIA
201: SQLNLLDEQQ DASYVANLQL ELRQARDRVG ELESERRSTK KKLDHLFKKL AEEKAAWRSR EHEKMRAVLE DMKANLDHEK KNRRRLELIN MKLVNELKET
301: KMSANQLVQE YDEERKTREL TEEVCNELAR EVEEDKAEIE ALKHDIQKLR EEVDEERKML QMAEVWREER VQMKLVDAKL TLDAKYTELS RLQQDVEAFV
401: AGCSSARGDI TVVEQAENII HAIKSVRAQD VEFRYEPPAE SEDIFSIFEE LRPSEEPVIK DIEQCYKNSS IVCESEIQEA SPMTDIFLEK PAKAAYSNKN
501: PHNESEAGDA SSWETISHED MQGSSGSPDG SQSSINKIFD GSISWTSRND FEYGEIEKLK DDLADAYLMT MTQPKKKESA ISKLWKSSRP KNSDVSKKDA
601: TEALNGRSSN VRLSVGTHST IESGVQDIGL SSPSVGQWSS PDSMNIQFNR GFRGCMEYPR ASQKHSLKEK LMEARMVSQK VQLRQVLKQK I
001: MESITEWDLG SLRTYYSVEP SENFQEDEFL DFNLVPCLQT ELWKAQTRIK ELEAEKFKSE ETIRCLIRNQ RNEKEETTNP FVDYLKEKLS KEREEKKRVK
101: AENSRLKKKI LDMESSVNRL RRERDTMEKV CEELVTRIDE LKVNTRRVWD ETEEERQMLQ MAEMWREERV RVKFMDAKLA LQEKYEEMNL FVVELEKCLE
201: TAREVGGIEE KRLRHGEGLI KMAKSMEVVD SKIDFERFEF VSDEGNV
101: AENSRLKKKI LDMESSVNRL RRERDTMEKV CEELVTRIDE LKVNTRRVWD ETEEERQMLQ MAEMWREERV RVKFMDAKLA LQEKYEEMNL FVVELEKCLE
201: TAREVGGIEE KRLRHGEGLI KMAKSMEVVD SKIDFERFEF VSDEGNV
Arabidopsis Description
BRANCHLESS TRICHOME-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SAA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.