Factsheet for Solyc07g064580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400057488	Potato	nucleus	96.58	93.93
Solyc12g005010.1.1	Tomato	nucleus	66.27	66.47
VIT_19s0090g00370.t01	Wine grape	plastid	58.99	55.37
KRH73733	Soybean	nucleus	56.61	55.14
KRH14411	Soybean	nucleus	56.02	54.64
KRG98777	Soybean	nucleus	56.17	54.08
Bra018866.1-P	Field mustard	nucleus	53.94	53.94
CDY37111	Canola	nucleus	53.79	53.31
CDY22812	Canola	nucleus	52.15	53.18
AT1G50660.1	Thale cress	nucleus	57.21	53.1
KRH46168	Soybean	nucleus	55.13	53.08
GSMUA_Achr6P00380_001	Banana	nucleus	32.69	51.4
GSMUA_Achr7P00230_001	Banana	nucleus	37.3	50.91
AT3G20350.1	Thale cress	plastid	48.74	48.74
CDY25414	Canola	mitochondrion	46.06	48.67
Bra035788.1-P	Field mustard	mitochondrion	46.06	48.67
GSMUA_Achr6P19720_001	Banana	nucleus	50.67	48.64
GSMUA_Achr8P01540_001	Banana	nucleus	36.11	48.02
CDY29821	Canola	mitochondrion	45.32	47.73
GSMUA_Achr10P...	Banana	nucleus, plastid	49.78	47.52
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	47.85	45.16
GSMUA_Achr2P03040_001	Banana	nucleus	30.46	44.76
Zm00001d026344_P001	Maize	plastid	45.02	44.1
EES12886	Sorghum	plastid	44.73	43.5
Os04t0625000-01	Rice	nucleus	44.73	43.25
Zm00001d002252_P001	Maize	plastid	43.98	43.15
TraesCS1B01G329400.1	Wheat	plastid	41.9	42.92
TraesCS1A01G317000.1	Wheat	plastid	41.75	42.51
TraesCS1D01G317000.1	Wheat	nucleus, plastid	41.46	42.47
TraesCS2B01G492000.1	Wheat	plastid	42.64	41.9
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	41.75	41.63
TraesCS2A01G469100.1	Wheat	plastid	42.79	41.56
TraesCS2D01G469200.1	Wheat	plastid	42.5	41.39
EES19759	Sorghum	plastid	39.97	40.27
Os08t0190700-00	Rice	nucleus	34.92	39.63
Zm00001d012593_P001	Maize	plastid	35.22	39.57
Zm00001d038595_P001	Maize	nucleus, plastid	39.52	39.47
OQU80028	Sorghum	plastid	38.63	39.39
EES01592	Sorghum	plastid	38.19	38.02
Zm00001d000005_P002	Maize	plastid	38.78	37.88
Zm00001d043218_P001	Maize	plastid	37.44	37.44
Solyc02g080520.2.1	Tomato	nucleus	35.07	37.28
TraesCS7D01G288600.1	Wheat	plastid	34.03	35.61
TraesCS7B01G197400.1	Wheat	plastid	34.03	35.56
TraesCS7A01G295000.1	Wheat	plastid	32.99	35.35
HORVU7Hr1G065950.7	Barley	vacuole	33.14	33.89
GSMUA_Achr4P23750_001	Banana	cytosol	20.36	33.58
Solyc06g074190.2.1	Tomato	nucleus	20.06	24.91
Solyc11g068720.1.1	Tomato	nucleus	21.84	23.19
Solyc10g083190.1.1	Tomato	plastid	22.44	22.84
Solyc01g095390.2.1	Tomato	nucleus	13.97	16.49
Solyc08g081830.2.1	Tomato	nucleus, plastid	16.34	16.22

Protein Annotations

EnsemblPlants:Solyc07g064580.2.1	EnsemblPlantsGene:Solyc07g064580.2	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF2	SEG:seg
UniParc:UPI000276C61D	UniProt:K4CHD7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7:+:66661310..66664557

Molecular Weight (calculated)

76547.1 Da

IEP (calculated)

7.999

GRAVY (calculated)

-0.887

Length

673 amino acids

Sequence
(BLAST)

001: MKVTANNRAE LPAIASSKLV NTLPDSDLLQ NPFCSRKPPR RKIKNSGGAG VRLRRDIAGA PGGKRSRPST PLLRWKYNED VNDNACTWED KSTVELGRKS
101: GRKVRNLVSA RKLAAGLWRL QLPEVPNIPA QKLPQAGHID LPFFDHHHIR ENDSHIDDSE QSPRSVSGPR YGLYHKLEPS FQYPNSAMEG ATKWDPVGWT
201: IAEEIKEIYG HQKVPNKQSK TAAMISTLEA ELERARTRIH QLEMERRSSK KKLEQFLRKL SEEKAAWRSR EHEKIRAIID DMKADLSREK KNRQRLEIVN
301: SKLVNELADA KLSAKRYLQD YEKERKGREL IEEVCEELAK EIGEDKAEVE ALKRESHSLR EEVDEERKML QMAEVWREER VQMKLVDAKV TLEEKYSQMN
401: RLIAELESFL SSRGMNPDEE VIERAEQLKQ EAASVNIRDI SEFTYEPPNP DDIFSVFEDL NFVESNEREV EPCPAYSSAS HPSKICTFSP DDGVYNKDNF
501: LRHSLAYNQS DLEEEGSEWE TVSHLDEQGS SYSAEGSVCS VNKNCRHSNA SMEISEVYSG QGRQLKKVSS ISRLWKSNGD NYKKISADGI HGRLSNGRLS
601: NGATLSPDCG SSKGEFSPSG SSLDSGNPQI TRGMKGCIEW PRNSHKHSLK AKLLEARMES QKVQLRHVLK QKI

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.