Factsheet for GSMUA_Achr4P23750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00380_001	Banana	nucleus	33.58	32.01
GSMUA_Achr7P00230_001	Banana	nucleus	37.01	30.63
KRH20862	Soybean	cytosol	19.61	29.74
GSMUA_Achr2P03040_001	Banana	nucleus	28.43	25.33
KRH02074	Soybean	plastid	24.26	23.35
GSMUA_Achr8P01540_001	Banana	nucleus	27.94	22.53
KRH51081	Soybean	plastid	23.77	21.7
Solyc07g064580.2.1	Tomato	nucleus	33.58	20.36
TraesCS1D01G317000.1	Wheat	nucleus, plastid	32.6	20.24
TraesCS1A01G317000.1	Wheat	plastid	32.6	20.12
TraesCS1B01G329400.1	Wheat	plastid	32.35	20.09
PGSC0003DMT400057488	Potato	nucleus	33.09	19.51
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	32.11	19.41
PGSC0003DMT400071667	Potato	nucleus	32.35	19.38
KRH11424	Soybean	nucleus, plastid	18.14	19.22
Zm00001d012593_P001	Maize	plastid	28.19	19.2
KRH14411	Soybean	nucleus	32.11	18.99
KRH73733	Soybean	nucleus	32.11	18.96
CDY22812	Canola	nucleus	30.64	18.94
Solyc12g005010.1.1	Tomato	nucleus	31.13	18.93
Os08t0190700-00	Rice	nucleus	27.45	18.89
EES19759	Sorghum	plastid	30.88	18.86
Zm00001d038595_P001	Maize	nucleus, plastid	31.13	18.84
Bra018866.1-P	Field mustard	nucleus	30.88	18.72
Zm00001d026344_P001	Maize	plastid	31.37	18.63
GSMUA_Achr6P19720_001	Banana	nucleus	31.86	18.54
Zm00001d002252_P001	Maize	plastid	31.13	18.51
GSMUA_Achr10P...	Banana	nucleus, plastid	31.86	18.44
VIT_19s0090g00370.t01	Wine grape	plastid	32.35	18.41
CDY37111	Canola	nucleus	30.64	18.41
CDY25414	Canola	mitochondrion	28.68	18.37
Bra035788.1-P	Field mustard	mitochondrion	28.68	18.37
Zm00001d043218_P001	Maize	plastid	30.15	18.28
CDY29821	Canola	mitochondrion	28.43	18.15
EES12886	Sorghum	plastid	30.64	18.06
AT1G50660.1	Thale cress	nucleus	31.86	17.93
VIT_10s0116g01830.t01	Wine grape	nucleus	32.35	17.91
PGSC0003DMT400042430	Potato	nucleus	27.45	17.83
KRH46168	Soybean	nucleus	30.15	17.6
AT3G20350.1	Thale cress	plastid	28.92	17.53
EES01592	Sorghum	plastid	28.92	17.46
Solyc02g080520.2.1	Tomato	nucleus	26.96	17.38
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	30.15	17.25
Os04t0625000-01	Rice	nucleus	29.41	17.24
TraesCS2D01G469200.1	Wheat	plastid	29.17	17.22
OQU80028	Sorghum	plastid	27.7	17.12
TraesCS2B01G492000.1	Wheat	plastid	28.68	17.08
TraesCS2A01G469100.1	Wheat	plastid	28.92	17.03
KRG98777	Soybean	nucleus	29.17	17.02
TraesCS7A01G295000.1	Wheat	plastid	25.25	16.4
TraesCS7D01G288600.1	Wheat	plastid	25.74	16.33
Zm00001d000005_P002	Maize	plastid	27.45	16.26
TraesCS7B01G197400.1	Wheat	plastid	25.0	15.84
HORVU7Hr1G065950.7	Barley	vacuole	24.51	15.2
KRH36516	Soybean	plastid	20.59	14.38
KRH11499	Soybean	plastid	23.04	13.99
GSMUA_Achr6P16290_001	Banana	nucleus	19.36	12.8
GSMUA_Achr10P...	Banana	nucleus	15.69	9.71
GSMUA_Achr10P...	Banana	nucleus	15.44	9.35
GSMUA_Achr6P08260_001	Banana	nucleus	11.27	8.03

Protein Annotations

EnsemblPlants:GSMUA_Achr4P23750_001	EnsemblPlants:GSMUA_Achr4T23750_001	EnsemblPlantsGene:GSMUA_Achr4G23750_001	Gene3D:3.40.50.720	ncoils:Coil	PANTHER:PTHR31071
PANTHER:PTHR31071:SF2	UniParc:UPI0002949B6F	UniProt:M0SRI6	MapMan:35.1	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G23750_001]

Coordinates

chr4:-:23748714..23757187

Molecular Weight (calculated)

46910.6 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.494

Length

408 amino acids

Sequence
(BLAST)

001: MRKPWEEKAS WQISEQEKVR DIIAAIKDDL NRERRSRKRM EIMNSKLVSE LAEAKLSAKQ YLQNYEKERK ERELIQEVCN KLAKEIRDNK AEVESLKRES
101: TKLREELDEE RNTLQMAEVW REERAQMKLV DTKLMLEERH SELIKLQAGI DAFLRGHGST RANTSVQKAD KAQKGNIHKA TAEVSSLFKC PQETQERARG
201: RGCQRWPRQP SRRGRSSAIV SSVDEEGLGK LWAKCMCSFL QELNDAVGVK FIDESPENLI EKFFTEFASV IANSPYTSMT LVSMDVLVQS LCCAGCLLGY
301: LSMLHGNLKV CRTELYRPIW AVRTGPIGCR YTDRLLPVRV HCITVAVQYS TIWRLANVML VVAHSYGLTG MVRISTKEHI ITESKPDFFL DDNHVHGTWP
401: ELVNSFMP

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.