Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 59.33 | 58.01 |
| Os02t0260500-00 | Rice | nucleus | 32.63 | 43.26 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 43.25 | 43.25 |
| OQU76466 | Sorghum | nucleus | 41.73 | 38.57 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 39.76 | 38.47 |
| KRH77618 | Soybean | nucleus | 37.63 | 37.24 |
| KRH27868 | Soybean | nucleus | 37.48 | 36.92 |
| KXG29970 | Sorghum | nucleus | 39.0 | 36.71 |
| Zm00001d037050_P001 | Maize | nucleus | 36.72 | 36.56 |
| Zm00001d053356_P002 | Maize | nucleus | 35.05 | 36.44 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 41.12 | 36.42 |
| PGSC0003DMT400032084 | Potato | nucleus | 37.33 | 36.28 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 41.12 | 36.13 |
| KRH47994 | Soybean | nucleus | 35.96 | 36.13 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 36.87 | 35.84 |
| KRH06548 | Soybean | nucleus | 35.66 | 35.66 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 40.52 | 35.6 |
| CDY34403 | Canola | nucleus | 29.89 | 34.26 |
| Bra027683.1-P | Field mustard | nucleus | 29.74 | 34.03 |
| Bra025484.1-P | Field mustard | nucleus | 30.5 | 33.78 |
| CDY39728 | Canola | nucleus | 30.5 | 33.72 |
| CDY25566 | Canola | nucleus | 29.44 | 33.51 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 16.54 | 33.13 |
| AT5G41620.1 | Thale cress | nucleus | 31.26 | 33.07 |
| CDY44461 | Canola | nucleus | 30.2 | 33.0 |
| PGSC0003DMT400000259 | Potato | nucleus | 32.17 | 32.47 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 41.27 | 32.34 |
| Solyc01g095390.2.1 | Tomato | nucleus | 27.77 | 32.11 |
| KRG97105 | Soybean | nucleus | 31.11 | 31.88 |
| AT1G64180.1 | Thale cress | nucleus | 28.68 | 31.87 |
| KRH68854 | Soybean | nucleus | 28.07 | 31.2 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 20.03 | 21.39 |
| GSMUA_Achr6P00380_001 | Banana | nucleus | 13.51 | 20.79 |
| GSMUA_Achr7P00230_001 | Banana | nucleus | 14.26 | 19.07 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 16.39 | 18.85 |
| GSMUA_Achr8P01540_001 | Banana | nucleus | 14.26 | 18.58 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 19.58 | 18.3 |
| GSMUA_Achr6P19720_001 | Banana | nucleus | 19.12 | 17.97 |
| GSMUA_Achr2P03040_001 | Banana | nucleus | 12.14 | 17.47 |
| GSMUA_Achr9P30230_001 | Banana | nucleus, plastid | 18.21 | 16.83 |
| GSMUA_Achr4P23750_001 | Banana | cytosol | 9.71 | 15.69 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P14630_001 | EnsemblPlants:GSMUA_Achr10T14630_001 | EnsemblPlantsGene:GSMUA_Achr10G14630_001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF4 |
| SEG:seg | UniParc:UPI000294959A | UniProt:M0RI89 | MapMan:35.1 | : | : |
Description
Putative Uncharacterized protein At5g41620 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14630_001]
Coordinates
chr10:-:22837475..22842312
Molecular Weight (calculated)
73872.4 Da
IEP (calculated)
7.724
GRAVY (calculated)
-0.873
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDKAAAAA IDEGEGDGAG KEAPLGVKLR RAISANRRGG LCTPVPSWKL EEPGLSDPDK AQPHRRSVSA RKLGAGLWEI QDVLTMSAAG RRGARIRRHR
101: RDGKALEDGI VCVSLSDFSC QPQSVGSLRR HVEASSIKHQ HLHEGNSHNL QPVSPASYTS SYKIAPFNLA ITHSSATDLK DKFGDAGYGL RTSTELLKVL
201: NHIWSLEEHN ESNASLVKAL KGELEHARAR IQELMQEQHA YRGEMDHLMK QVTEDKIIRK EKEQQRIKAV VQSIRDELED ERRLRKRSES LHRKLGKELS
301: EAKAAFMKAA KDLENVRKTN GLLEDLCDEF AKGIRDYEHE VRQLKQRSVK VCDHKVDRLV LHISEAWLDE REQMNIAEAR GDIANKTMVA DRLRSEIEAF
401: IQASRSSVSN NGYLYENHEK REINLRRQSL ESVHLNGAAS APQDADDDDD SVASDLHCFE LNMGASNTVS IDQQQRNGHN VVEKFDSSRT KRSTFSVEER
501: GSSEKSKNQI SSSLHLKCRE EKDETKSCGS QMQLSNRTQG KHPDSNPESE GRCCKVDHNI SHGDEHHSHS SSKDHFLVAS EGIASGHFRN TSSNLNCIEQ
601: HKSPDVDISR SSSKLAEGVK ENTLKARLLE ARLEGQQARL KASDNEKKQV MPIRRYFGE
101: RDGKALEDGI VCVSLSDFSC QPQSVGSLRR HVEASSIKHQ HLHEGNSHNL QPVSPASYTS SYKIAPFNLA ITHSSATDLK DKFGDAGYGL RTSTELLKVL
201: NHIWSLEEHN ESNASLVKAL KGELEHARAR IQELMQEQHA YRGEMDHLMK QVTEDKIIRK EKEQQRIKAV VQSIRDELED ERRLRKRSES LHRKLGKELS
301: EAKAAFMKAA KDLENVRKTN GLLEDLCDEF AKGIRDYEHE VRQLKQRSVK VCDHKVDRLV LHISEAWLDE REQMNIAEAR GDIANKTMVA DRLRSEIEAF
401: IQASRSSVSN NGYLYENHEK REINLRRQSL ESVHLNGAAS APQDADDDDD SVASDLHCFE LNMGASNTVS IDQQQRNGHN VVEKFDSSRT KRSTFSVEER
501: GSSEKSKNQI SSSLHLKCRE EKDETKSCGS QMQLSNRTQG KHPDSNPESE GRCCKVDHNI SHGDEHHSHS SSKDHFLVAS EGIASGHFRN TSSNLNCIEQ
601: HKSPDVDISR SSSKLAEGVK ENTLKARLLE ARLEGQQARL KASDNEKKQV MPIRRYFGE
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.