Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 58.01 | 59.33 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 45.1 | 46.13 |
| Os02t0260500-00 | Rice | nucleus | 32.94 | 44.67 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 42.14 | 41.7 |
| KRH77618 | Soybean | nucleus | 39.91 | 40.39 |
| KRH27868 | Soybean | nucleus | 39.76 | 40.06 |
| OQU76466 | Sorghum | nucleus | 40.95 | 38.71 |
| KRH47994 | Soybean | nucleus | 37.54 | 38.57 |
| PGSC0003DMT400032084 | Potato | nucleus | 38.58 | 38.35 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 38.43 | 38.2 |
| KRH06548 | Soybean | nucleus | 37.09 | 37.94 |
| KXG29970 | Sorghum | nucleus | 38.87 | 37.43 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 18.1 | 37.08 |
| Zm00001d053356_P002 | Maize | nucleus | 34.57 | 36.75 |
| Bra027683.1-P | Field mustard | nucleus | 31.31 | 36.63 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 40.36 | 36.56 |
| Zm00001d037050_P001 | Maize | nucleus | 35.91 | 36.56 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 40.65 | 36.53 |
| CDY34403 | Canola | nucleus | 31.16 | 36.52 |
| PGSC0003DMT400000259 | Potato | nucleus | 35.31 | 36.45 |
| CDY39728 | Canola | nucleus | 31.9 | 36.07 |
| Bra025484.1-P | Field mustard | nucleus | 31.75 | 35.97 |
| CDY25566 | Canola | nucleus | 30.86 | 35.92 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 39.91 | 35.87 |
| CDY44461 | Canola | nucleus | 31.45 | 35.16 |
| Solyc01g095390.2.1 | Tomato | nucleus | 29.53 | 34.91 |
| AT5G41620.1 | Thale cress | nucleus | 32.2 | 34.83 |
| KRG97105 | Soybean | nucleus | 33.09 | 34.68 |
| AT1G64180.1 | Thale cress | nucleus | 30.12 | 34.23 |
| KRH68854 | Soybean | nucleus | 29.23 | 33.22 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 39.61 | 31.75 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 20.77 | 22.69 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 17.36 | 20.42 |
| GSMUA_Achr6P00380_001 | Banana | nucleus | 12.76 | 20.09 |
| GSMUA_Achr7P00230_001 | Banana | nucleus | 14.1 | 19.27 |
| GSMUA_Achr6P19720_001 | Banana | nucleus | 19.14 | 18.4 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 18.99 | 18.16 |
| GSMUA_Achr8P01540_001 | Banana | nucleus | 13.06 | 17.39 |
| GSMUA_Achr9P30230_001 | Banana | nucleus, plastid | 18.1 | 17.11 |
| GSMUA_Achr2P03040_001 | Banana | nucleus | 11.42 | 16.81 |
| GSMUA_Achr4P23750_001 | Banana | cytosol | 9.35 | 15.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P21980_001 | EnsemblPlants:GSMUA_Achr10T21980_001 | EnsemblPlantsGene:GSMUA_Achr10G21980_001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF4 |
| SEG:seg | UniParc:UPI0002951DD3 | UniProt:M0RKC3 | MapMan:35.1 | : | : |
Description
Putative Uncharacterized protein At5g41620 [Source:GMGC_GENE;Acc:GSMUA_Achr10G21980_001]
Coordinates
chr10:-:27335309..27341121
Molecular Weight (calculated)
75225.4 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.846
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGKGVAID DEEGSAGVKE DALGLKLRRG VTVGKKGGLC TPVPTWKLGD AGSADADAGE PKRSSVSARK LGANLWEIQD LMPVSVMSRR GAKIRRHADG
101: KALDDGPDRL AVRHEDLPQS AGSLRRQVAA SLVKHYKLNE RNSRALQPVS PASYSSSMEI AAISEAITPS SSVNLKGKLG EAGYSLQTST ELLKVLNRIW
201: SLEEQHACNV SLVKALKVEL EHAQARIQEL MQEQHVYRHE MDDLMKQVAE DKLIRKNKEQ QKIKAAVQSI RDELEDERHL RRRSESLHRK LGKELSEVNA
301: AYMKAVKDLE RERKTNSPLE DLCDEFAKAV TDYEQEVREL KQKSQVACDH KVDRLVLHIS EAWLDERVQM NIAEDQGDLA EKTTITDRLS SEIESFLRAR
401: RSRAFGNDRL YRKDEKKDTN MRRQSLESVH LNGTTSAPHD ADDDDDSVAS EMHCFELNMA TRGNGSRDQP KQNTQNGIEK LDSKRTSTLP GEKIGCSESK
501: DDSSEYGEQM DKTKLRGSKV QLFDRVQRVH SPTDAESDKV AVDHIELSRA KKSDYQDHGN HHRESSHNHL LWRTQLGSAG GGDTDSGDVH QITSPVRQWK
601: YQISSPNQVV APESSSKSAQ GSKEGTLKAK LLEARLEGKH TRLKSLRRSS VARARHTTTS GIKSSIYILR FCAS
101: KALDDGPDRL AVRHEDLPQS AGSLRRQVAA SLVKHYKLNE RNSRALQPVS PASYSSSMEI AAISEAITPS SSVNLKGKLG EAGYSLQTST ELLKVLNRIW
201: SLEEQHACNV SLVKALKVEL EHAQARIQEL MQEQHVYRHE MDDLMKQVAE DKLIRKNKEQ QKIKAAVQSI RDELEDERHL RRRSESLHRK LGKELSEVNA
301: AYMKAVKDLE RERKTNSPLE DLCDEFAKAV TDYEQEVREL KQKSQVACDH KVDRLVLHIS EAWLDERVQM NIAEDQGDLA EKTTITDRLS SEIESFLRAR
401: RSRAFGNDRL YRKDEKKDTN MRRQSLESVH LNGTTSAPHD ADDDDDSVAS EMHCFELNMA TRGNGSRDQP KQNTQNGIEK LDSKRTSTLP GEKIGCSESK
501: DDSSEYGEQM DKTKLRGSKV QLFDRVQRVH SPTDAESDKV AVDHIELSRA KKSDYQDHGN HHRESSHNHL LWRTQLGSAG GGDTDSGDVH QITSPVRQWK
601: YQISSPNQVV APESSSKSAQ GSKEGTLKAK LLEARLEGKH TRLKSLRRSS VARARHTTTS GIKSSIYILR FCAS
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.