CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27868	Soybean	nucleus	92.64	92.23
VIT_02s0025g00840.t01	Wine grape	nucleus	60.36	59.03
PGSC0003DMT400032084	Potato	nucleus	55.41	54.42
Solyc08g081830.2.1	Tomato	nucleus, plastid	54.8	53.83
CDY39728	Canola	nucleus	45.65	51.01
Bra025484.1-P	Field mustard	nucleus	45.2	50.59
CDY44461	Canola	nucleus	45.8	50.58
AT5G41620.1	Thale cress	nucleus	47.0	50.24
CDY34403	Canola	nucleus	42.64	49.39
Bra027683.1-P	Field mustard	nucleus	42.34	48.96
CDY25566	Canola	nucleus	41.29	47.5
AT1G64180.1	Thale cress	nucleus	41.44	46.54
KRH06548	Soybean	nucleus	42.04	42.49
KRH47994	Soybean	nucleus	40.99	41.62
GSMUA_Achr10P...	Banana	nucleus	40.39	39.91
GSMUA_Achr10P...	Banana	nucleus	37.24	37.63
Os02t0260500-00	Rice	nucleus	27.93	37.42
KRH68854	Soybean	nucleus	32.88	36.93
KRG97105	Soybean	nucleus	35.29	36.55
Zm00001d053356_P002	Maize	nucleus	32.58	34.23
KXG29970	Sorghum	nucleus	34.68	33.0
OQU76466	Sorghum	nucleus	35.14	32.82
Zm00001d037050_P001	Maize	nucleus	31.68	31.87
TraesCS7D01G335400.1	Wheat	nucleus	33.03	29.57
TraesCS7A01G344200.1	Wheat	nucleus	33.18	29.47
TraesCS7B01G238900.1	Wheat	nucleus	32.58	28.93
Os06t0507900-01	Rice	cytosol, nucleus	13.51	27.36
HORVU7Hr1G080670.9	Barley	nucleus, plastid	33.03	26.16
KRG96225	Soybean	nucleus	25.08	25.5
KRH67971	Soybean	plastid	24.77	25.0
KRH20862	Soybean	cytosol	9.16	22.68
KRH25284	Soybean	plastid	19.67	19.88
KRH30384	Soybean	plastid	19.52	19.64
KRH02074	Soybean	plastid	12.46	19.58
KRH73733	Soybean	nucleus	19.97	19.25
KRH11424	Soybean	nucleus, plastid	10.96	18.96
KRH51081	Soybean	plastid	12.46	18.57
KRG98777	Soybean	nucleus	19.37	18.45
KRH14411	Soybean	nucleus	18.92	18.26
KRH46168	Soybean	nucleus	19.07	18.17
KRH36516	Soybean	plastid	13.06	14.9
KRH11499	Soybean	plastid	12.31	12.2

Protein Annotations

EMBL:ACUP02000681	EnsemblPlants:KRH77618	EnsemblPlantsGene:GLYMA_01G223700	EntrezGene:100781629	ncoils:Coil	PANTHER:PTHR31071
PANTHER:PTHR31071:SF9	ProteinID:KRH77618	ProteinID:KRH77618.1	SEG:seg	UniParc:UPI0002336B84	UniProt:I1JAB4
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:55246035..55249924

Molecular Weight (calculated)

74927.6 Da

IEP (calculated)

8.838

GRAVY (calculated)

-0.917

Length

666 amino acids

Sequence
(BLAST)

001: MKSEEGEAEK VEKLGEKLRR GVLVGKSRGP CTPTHTHNYH SSSVLSVSAR KLAAALWEFN HSFPLFQMHH HRSANNASAA AAGGAGADPR LRRHHHYILH
101: KDRAPDISNF LADASPSSPD QPASASSLRR HVAASLMQHH RAIERNNHAL QPLSPASYGS SMEMTPYNPG ATPTSSLEFK GRIGDPHYSL KTSTELLKVL
201: NRIWSLEEQH ASNISLIKAL KSELDHARVR IKELLRDRQA DRHEIDDLMK QIAEDKLVRK SKEQDRLHAA VQSVRDELED ERKLRKRSES IHRKLARDLS
301: EVKSSLTSAV KELNQERTRR KLLEDLCDEF ARGINEYERE VHTVKHKSDK DWVQGADQDR LILHISESWL DERMQMQLEA GQNGFTDKSI VDKLSLEIET
401: FLKAKQNSRG SENVAVRNRR NSLESVPLND RVSAPQEVGD DDDSVGSDSN CFELNKPSNK GSKVYEEEPV DKIFKETSKT NQRKKKSIPR EGLKHRSPSS
501: LQVKFEEQMA WAMSSDSNKK SQSIDADQGK ITDTRPVEGT VSERSEHFEI YENDDSERKN NPAELHNSSK NHIIDNLIRG QLLASEGGNM HAENNYGEAS
601: CSNAGWRNQA SPVKQWMAKL ASQDLDISEA SKVPSGSKES NTLKAKLLEA RSKGQRSCLK ALKGSF

Best Arabidopsis Sequence Match ( AT5G41620.1 )
(BLAST)

001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG

Arabidopsis Description

Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.