Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G335400.1 | Wheat | nucleus | 94.8 | 95.56 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 94.4 | 94.4 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 92.67 | 82.64 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 29.07 | 66.26 |
| OQU76466 | Sorghum | nucleus | 61.87 | 65.08 |
| Zm00001d037050_P001 | Maize | nucleus | 56.67 | 64.2 |
| GSMUA_Achr10P... | Banana | nucleus | 35.6 | 40.52 |
| GSMUA_Achr10P... | Banana | nucleus | 35.87 | 39.91 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 33.47 | 38.09 |
| KRH27868 | Soybean | nucleus | 29.6 | 33.18 |
| KRH77618 | Soybean | nucleus | 28.93 | 32.58 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 29.47 | 32.45 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 29.07 | 32.15 |
| KRH47994 | Soybean | nucleus | 28.0 | 32.01 |
| KRH06548 | Soybean | nucleus | 28.0 | 31.87 |
| PGSC0003DMT400032084 | Potato | nucleus | 28.67 | 31.71 |
| PGSC0003DMT400000259 | Potato | nucleus | 27.47 | 31.55 |
| Solyc01g095390.2.1 | Tomato | nucleus | 23.87 | 31.4 |
| CDY34403 | Canola | nucleus | 23.47 | 30.61 |
| Bra027683.1-P | Field mustard | nucleus | 23.2 | 30.21 |
| CDY25566 | Canola | nucleus | 23.2 | 30.05 |
| KRG97105 | Soybean | nucleus | 25.6 | 29.86 |
| CDY39728 | Canola | nucleus | 23.6 | 29.7 |
| Bra025484.1-P | Field mustard | nucleus | 23.47 | 29.58 |
| CDY44461 | Canola | nucleus | 23.6 | 29.35 |
| KRH68854 | Soybean | nucleus | 23.07 | 29.17 |
| AT1G64180.1 | Thale cress | nucleus | 23.07 | 29.17 |
| AT5G41620.1 | Thale cress | nucleus | 23.73 | 28.57 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 14.8 | 19.93 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 14.53 | 18.86 |
| TraesCS1B01G329400.1 | Wheat | plastid | 14.53 | 16.59 |
| TraesCS2B01G286200.1 | Wheat | plastid | 13.47 | 16.48 |
| TraesCS2B01G492000.1 | Wheat | plastid | 14.13 | 15.47 |
| TraesCS7B01G197400.1 | Wheat | plastid | 12.53 | 14.6 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G238900.1 | EnsemblPlantsGene:TraesCS7B01G238900 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF4 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:444461128..444474298
Molecular Weight (calculated)
83924.4 Da
IEP (calculated)
9.022
GRAVY (calculated)
-0.882
Length
750 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEPPTAAA AAAALPQKCG VGGEQPCHGT PNRPREEPQE DSAAPAPLRR ELAAARARRR AGRATPSPSW KLEASPPRPE KPPADAAAAG RRSSSGASAR
101: QLGATLWEIQ DVIRAAGAGR RIRRRARRGP AASPRRDGDD NDDVDRAHIS GGCGRDLSAP LMEHEKLHED RCHSRQSLSP ASYTSSIGAA TINLVSPTRS
201: LNFRDRYRDA GCNLKTSTEL LKVLNRIWSL EEQHAVDVSA VKGLKSELQN TQARVQELTQ ERQRYHYEIE SLARQVSEDK MARKNKEQEK LRATLRLLQE
301: ELEAERHLRK HSENLHRKLG KELSAMKPAF LKAVKDLEKE QKATRLLEDL CDEFALGIRN YEEEVRVLKQ RHVKEYEHKT DKLVVHISEA WLDERIQMQN
401: ADARGDSEGK TSITERLSGE IQSFLHGRRS SNFYGVNKHT GNEKGDTSLC RQSLESLHLN GATSAPRLAE DDENSVASDL HCFELNMHGD AVQTHDLAGT
501: RRTVADCMYS PMRRLEFSDG VSVEGSRIST ARPRSEKGKV KPGSSKAQLH TSAPEISSRN CDRIDPIDVQ NETVMTQVSR RLHDDLLKIK SEAPQHAFLE
601: RKPHDHHPRT YQFRECASSS DLLHNLHSPA RQLKNHQRAS LDYQISECAT AGDVRGLRSP SWQLKNQRAS LDYQISECAT TGDLHNLCSP SRQLKNHHRP
701: SLDHEISESS PAQSLGSKDN TLKAKLLQAR LEGQHARIWA SGYPLISTRR
101: QLGATLWEIQ DVIRAAGAGR RIRRRARRGP AASPRRDGDD NDDVDRAHIS GGCGRDLSAP LMEHEKLHED RCHSRQSLSP ASYTSSIGAA TINLVSPTRS
201: LNFRDRYRDA GCNLKTSTEL LKVLNRIWSL EEQHAVDVSA VKGLKSELQN TQARVQELTQ ERQRYHYEIE SLARQVSEDK MARKNKEQEK LRATLRLLQE
301: ELEAERHLRK HSENLHRKLG KELSAMKPAF LKAVKDLEKE QKATRLLEDL CDEFALGIRN YEEEVRVLKQ RHVKEYEHKT DKLVVHISEA WLDERIQMQN
401: ADARGDSEGK TSITERLSGE IQSFLHGRRS SNFYGVNKHT GNEKGDTSLC RQSLESLHLN GATSAPRLAE DDENSVASDL HCFELNMHGD AVQTHDLAGT
501: RRTVADCMYS PMRRLEFSDG VSVEGSRIST ARPRSEKGKV KPGSSKAQLH TSAPEISSRN CDRIDPIDVQ NETVMTQVSR RLHDDLLKIK SEAPQHAFLE
601: RKPHDHHPRT YQFRECASSS DLLHNLHSPA RQLKNHQRAS LDYQISECAT AGDVRGLRSP SWQLKNQRAS LDYQISECAT TGDLHNLCSP SRQLKNHHRP
701: SLDHEISESS PAQSLGSKDN TLKAKLLQAR LEGQHARIWA SGYPLISTRR
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.