Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G335400.1 | Wheat | nucleus | 94.4 | 95.16 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 94.4 | 94.4 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 93.07 | 83.0 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 29.6 | 67.48 |
| OQU76466 | Sorghum | nucleus | 62.27 | 65.5 |
| Zm00001d037050_P001 | Maize | nucleus | 56.8 | 64.35 |
| GSMUA_Achr10P... | Banana | nucleus | 36.13 | 41.12 |
| GSMUA_Achr10P... | Banana | nucleus | 36.53 | 40.65 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 33.87 | 38.54 |
| KRH27868 | Soybean | nucleus | 30.13 | 33.78 |
| KRH77618 | Soybean | nucleus | 29.47 | 33.18 |
| KRH47994 | Soybean | nucleus | 28.8 | 32.93 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 29.87 | 32.89 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 29.33 | 32.45 |
| KRH06548 | Soybean | nucleus | 28.4 | 32.32 |
| PGSC0003DMT400032084 | Potato | nucleus | 29.07 | 32.15 |
| PGSC0003DMT400000259 | Potato | nucleus | 27.87 | 32.01 |
| Solyc01g095390.2.1 | Tomato | nucleus | 24.13 | 31.75 |
| CDY34403 | Canola | nucleus | 24.13 | 31.48 |
| CDY25566 | Canola | nucleus | 24.0 | 31.09 |
| Bra027683.1-P | Field mustard | nucleus | 23.87 | 31.08 |
| Bra025484.1-P | Field mustard | nucleus | 24.27 | 30.59 |
| CDY39728 | Canola | nucleus | 24.27 | 30.54 |
| KRG97105 | Soybean | nucleus | 26.0 | 30.33 |
| AT1G64180.1 | Thale cress | nucleus | 23.73 | 30.02 |
| CDY44461 | Canola | nucleus | 24.13 | 30.02 |
| AT5G41620.1 | Thale cress | nucleus | 24.4 | 29.37 |
| KRH68854 | Soybean | nucleus | 23.07 | 29.17 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 14.67 | 19.43 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 13.6 | 17.62 |
| TraesCS2A01G256300.2 | Wheat | plastid | 13.87 | 16.88 |
| TraesCS1A01G317000.1 | Wheat | plastid | 14.53 | 16.49 |
| TraesCS2A01G469100.1 | Wheat | plastid | 14.4 | 15.58 |
| TraesCS7A01G295000.1 | Wheat | plastid | 12.53 | 14.97 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G344200.1 | EnsemblPlantsGene:TraesCS7A01G344200 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF4 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:506132426..506138127
Molecular Weight (calculated)
83842.2 Da
IEP (calculated)
9.103
GRAVY (calculated)
-0.915
Length
750 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEPPPPAA AGAAVPRKCG VGGEQPGHGT PNRPREAQED QAAPAPLRRE LAAARARRRA GRATPSPSWK LEASPPRPEE PPADAAAAGR RSSSGASARQ
101: LGATLWEIQD VVRAAGAGRR IRRRARRGPA ASPHRGGDDD DDVDRPHISG GCGRDLSAPL MEHEKLHEDR CHSRQSLSPA SYTSSIGAAT INLVSPTRSL
201: NFRDRYRDAG CNLKTSTELL KVLNRIWSLE EQHAVDVSAV KGLKSELQNT QARVQELTQE RQRYHYEIES LARQVTEDKM ARKNKEQEKL RATLCSLQEE
301: LEAERHLRKH SENLHRKLGK ELSAMKPAFL KAVKDLEKEQ KATRLLEDLC DEFALGIRNY EEEVRVLKQR HVKEYEQKTD KLVVHISEAW LDERIQMQNA
401: DARGDSEGKT SITERLSGEI RSFLHGRRSS NFYGVNKHAG NEKGDASLCR QSLESLHLNG ATSAPRLAED DENSVASDLH CFELNMHGDA VQTHDLAGTR
501: RTVADCMYSP MRRLEFSDGL SVEGSRISSA RPCSEKGKVK PRSSKAQLNT SAPEISSRNG DKIDPIDEQN ETVMTQVSRR LHDDLLKIKS EAPQHAFLER
601: KPHDHHPRTY QFRECAASSS DLLHNLHSPA RQLKNHQRAP LDYQTSECTT TGDLRGLRSP SWQLKNQRAS LDYQISECAT TGDMHNLRSP SWQLKNHHRS
701: SLDHEISESS PARSLGSKDN TLKAKLLQAR LEGQHARIRA SGYPLISTRR
101: LGATLWEIQD VVRAAGAGRR IRRRARRGPA ASPHRGGDDD DDVDRPHISG GCGRDLSAPL MEHEKLHEDR CHSRQSLSPA SYTSSIGAAT INLVSPTRSL
201: NFRDRYRDAG CNLKTSTELL KVLNRIWSLE EQHAVDVSAV KGLKSELQNT QARVQELTQE RQRYHYEIES LARQVTEDKM ARKNKEQEKL RATLCSLQEE
301: LEAERHLRKH SENLHRKLGK ELSAMKPAFL KAVKDLEKEQ KATRLLEDLC DEFALGIRNY EEEVRVLKQR HVKEYEQKTD KLVVHISEAW LDERIQMQNA
401: DARGDSEGKT SITERLSGEI RSFLHGRRSS NFYGVNKHAG NEKGDASLCR QSLESLHLNG ATSAPRLAED DENSVASDLH CFELNMHGDA VQTHDLAGTR
501: RTVADCMYSP MRRLEFSDGL SVEGSRISSA RPCSEKGKVK PRSSKAQLNT SAPEISSRNG DKIDPIDEQN ETVMTQVSRR LHDDLLKIKS EAPQHAFLER
601: KPHDHHPRTY QFRECAASSS DLLHNLHSPA RQLKNHQRAP LDYQTSECTT TGDLRGLRSP SWQLKNQRAS LDYQISECAT TGDMHNLRSP SWQLKNHHRS
701: SLDHEISESS PARSLGSKDN TLKAKLLQAR LEGQHARIRA SGYPLISTRR
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.