Factsheet for Zm00001d037050_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76466	Sorghum	nucleus	91.84	85.27
Os06t0507900-01	Rice	cytosol, nucleus	30.82	62.01
TraesCS7A01G344200.1	Wheat	nucleus	64.35	56.8
TraesCS7D01G335400.1	Wheat	nucleus	63.75	56.72
TraesCS7B01G238900.1	Wheat	nucleus	64.2	56.67
HORVU7Hr1G080670.9	Barley	nucleus, plastid	63.9	50.3
Zm00001d053356_P002	Maize	nucleus	48.04	50.16
GSMUA_Achr10P...	Banana	nucleus	36.56	36.72
GSMUA_Achr10P...	Banana	nucleus	36.56	35.91
VIT_15s0046g01530.t01	Wine grape	mitochondrion	34.14	34.29
KRH27868	Soybean	nucleus	33.08	32.74
KRH77618	Soybean	nucleus	31.87	31.68
VIT_02s0025g00840.t01	Wine grape	nucleus	32.48	31.57
Solyc08g081830.2.1	Tomato	nucleus, plastid	31.42	30.68
PGSC0003DMT400032084	Potato	nucleus	31.27	30.53
KRH47994	Soybean	nucleus	30.21	30.49
KRH06548	Soybean	nucleus	29.61	29.74
CDY34403	Canola	nucleus	25.53	29.39
Bra027683.1-P	Field mustard	nucleus	25.38	29.17
CDY25566	Canola	nucleus	24.92	28.5
PGSC0003DMT400000259	Potato	nucleus	27.79	28.18
Bra025484.1-P	Field mustard	nucleus	24.77	27.56
Solyc01g095390.2.1	Tomato	nucleus	23.72	27.54
AT1G64180.1	Thale cress	nucleus	24.62	27.49
CDY39728	Canola	nucleus	24.62	27.35
KRG97105	Soybean	nucleus	26.43	27.22
CDY44461	Canola	nucleus	24.62	27.03
KRH68854	Soybean	nucleus	24.17	26.98
AT5G41620.1	Thale cress	nucleus	25.38	26.97
Zm00001d003996_P001	Maize	nucleus	15.56	18.1
Zm00001d038595_P001	Maize	nucleus, plastid	18.13	17.8
Zm00001d025208_P002	Maize	nucleus	15.26	17.24
Zm00001d012593_P001	Maize	plastid	15.56	17.2
Zm00001d043218_P001	Maize	plastid	16.92	16.64
Zm00001d026344_P001	Maize	plastid	16.62	16.01
Zm00001d018609_P001	Maize	mitochondrion, plastid	14.05	15.82
Zm00001d000402_P001	Maize	mitochondrion	12.84	15.51
Zm00001d002252_P001	Maize	plastid	15.56	15.01
Zm00001d000005_P002	Maize	plastid	15.41	14.8

Protein Annotations

EnsemblPlants:Zm00001d037050_P001	EnsemblPlants:Zm00001d037050_T001	EnsemblPlantsGene:Zm00001d037050	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF4
ProteinID:AQK82725.1	SEG:seg	UniParc:UPI000842B4AB	UniProt:A0A1D6LTI8	MapMan:35.1	:

Description

intracellular protein transport protein USO1-related

Coordinates

chr6:+:110481817..110494448

Molecular Weight (calculated)

73511.6 Da

IEP (calculated)

9.673

GRAVY (calculated)

-0.881

Length

662 amino acids

Sequence
(BLAST)

001: MEVEPPPAAA VAVAAALLKC RGNGGGGEPT LEAFGKARSR SPSSAAAAGP PQEPDGTPGP SRRRGEEEES LRRGLAAAQA RARARRKAGH ATPSPSWKLE
101: PSPPRPEDEA LAEADSGAGR RGAPAASARQ LGATLWEIQD VIRATGAGRR IRRRGRRAPT ADADRATTIN LISPTRSLDC NARFRQAGTD IKTSTELLKV
201: LNRIWSLEEQ HAADVSAMKG LKRELHHAQA CIQELMQERQ QYHQEIDSLA RQATEDKMAR RSKDQEKMRA ALRSLQEELE DERRLRKHSE TLHRKLGKEL
301: SEMKSAFCKA VKALEKEKKT TCLLEDLCDE FARGIRNYEE EVRLLKQKHV KEYELKFDKS VVHISEAWLD ERMQMQKTNM REYSSGKTSI TERLSSEIEG
401: FLHHAKRPGN SKNDNLDNGN EKRDASLCRQ SLESVHLNGA TSVPRLAEDD DDGSSIASDL HCFELNTHGG TIRNHELAGA RRRVTGCMHS PMRRLEYSNG
501: VSVEGSPMSN VPPCPKKEKT RSGVSRQHFI TSAPETSSRN DASLAPAADE QNETVMTQVS RRLRDDLLKI KSEAPQHAYL GQKSNQPRTN EFHEYSPAPA
601: PARRHLNNPA QSLDCEISEP PAHQLTGTKE NSLKVKLLQA RLEGQHARLS ASVFPLISTR RK

Best Arabidopsis Sequence Match ( AT5G41620.1 )
(BLAST)

001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG

Arabidopsis Description

Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.