Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES11990 | Sorghum | nucleus | 89.63 | 89.79 |
Zm00001d025208_P002 | Maize | nucleus | 88.4 | 85.84 |
Os04t0382800-00 | Rice | nucleus | 66.61 | 66.37 |
TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 61.86 | 63.2 |
TraesCS2A01G282200.1 | Wheat | nucleus | 61.69 | 62.01 |
HORVU2Hr1G069400.8 | Barley | nucleus | 55.18 | 61.69 |
TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 60.98 | 61.31 |
Zm00001d000402_P001 | Maize | mitochondrion | 36.2 | 37.59 |
Bra001412.1-P | Field mustard | nucleus | 16.87 | 27.67 |
GSMUA_Achr6P16290_001 | Banana | nucleus | 29.0 | 26.74 |
CDX88802 | Canola | nucleus | 21.97 | 26.71 |
Bra006620.1-P | Field mustard | nucleus | 21.09 | 26.61 |
VIT_06s0080g00930.t01 | Wine grape | plastid | 30.4 | 26.53 |
CDX70996 | Canola | nucleus | 22.14 | 26.53 |
CDY01038 | Canola | plastid | 28.12 | 26.23 |
AT3G11590.1 | Thale cress | plastid | 28.65 | 26.21 |
Bra034827.1-P | Field mustard | plastid | 27.94 | 25.9 |
CDY08511 | Canola | plastid | 27.94 | 25.85 |
PGSC0003DMT400067737 | Potato | nucleus | 25.66 | 25.57 |
Solyc11g068720.1.1 | Tomato | nucleus | 28.47 | 25.55 |
CDX92367 | Canola | mitochondrion, plastid | 21.44 | 25.42 |
Bra002404.1-P | Field mustard | nucleus | 21.62 | 25.41 |
PGSC0003DMT400072353 | Potato | plastid | 29.17 | 25.34 |
CDY67997 | Canola | mitochondrion, plastid | 20.91 | 25.27 |
KRG96225 | Soybean | nucleus | 28.82 | 25.04 |
CDY56601 | Canola | cytosol, golgi, plastid | 16.17 | 24.93 |
CDX73866 | Canola | cytosol | 16.17 | 24.93 |
VIT_08s0007g02790.t01 | Wine grape | plastid | 28.82 | 24.92 |
KRH67971 | Soybean | plastid | 28.65 | 24.7 |
AT5G22310.1 | Thale cress | nucleus | 20.74 | 24.53 |
Solyc10g083190.1.1 | Tomato | plastid | 28.47 | 24.51 |
Solyc06g074190.2.1 | Tomato | nucleus | 23.2 | 24.35 |
PGSC0003DMT400015076 | Potato | nucleus | 23.73 | 23.73 |
KRH25284 | Soybean | plastid | 27.24 | 23.52 |
KRH30384 | Soybean | plastid | 26.71 | 22.96 |
GSMUA_Achr6P08260_001 | Banana | nucleus | 20.56 | 20.42 |
Zm00001d018609_P001 | Maize | mitochondrion, plastid | 18.1 | 17.52 |
Zm00001d012593_P001 | Maize | plastid | 17.93 | 17.03 |
Zm00001d038595_P001 | Maize | nucleus, plastid | 20.04 | 16.91 |
Zm00001d026344_P001 | Maize | plastid | 20.39 | 16.89 |
Zm00001d002252_P001 | Maize | plastid | 19.86 | 16.47 |
Zm00001d043218_P001 | Maize | plastid | 19.33 | 16.34 |
Zm00001d053356_P002 | Maize | nucleus | 18.1 | 16.25 |
Zm00001d000005_P002 | Maize | plastid | 19.51 | 16.11 |
Zm00001d037050_P001 | Maize | nucleus | 18.1 | 15.56 |
Protein Annotations
EnsemblPlants:Zm00001d003996_P001 | EnsemblPlants:Zm00001d003996_T001 | EnsemblPlantsGene:Zm00001d003996 | EntrezGene:103646589 | ncoils:Coil | PANTHER:PTHR31071 |
PANTHER:PTHR31071:SF18 | ProteinID:ONM18126.1 | SEG:seg | UniParc:UPI0004DEBFE4 | UniProt:A0A1D6ECU9 | MapMan:35.1 |
Description
myosin heavy chain-related
Coordinates
chr2:-:74407929..74412907
Molecular Weight (calculated)
63649.7 Da
IEP (calculated)
8.211
GRAVY (calculated)
-0.830
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRLYSEEGA GADEATAAAT VRLANKIRKR RAVSSSGGSD PAAVGRRLRS RRPAVRLPRH RTSAGGDMSE SSRSRHCRGS GNRVAEGTLP SASARRLVDA
101: FWQNMGSGGL LDGDAAAARR SLVLWSGAST KVSKRSRSKS KVLEADGKGS RRNGHPRWFS ADLMSNGSAM EVGTFSQDDV SRCPEKTVNL DDLQNSLIAA
201: KELVKVLAHI WGPGELNPSS ASLISALRSE LDVARSHVRK LIKEQKSDAF EIEDLKLQLT EELESWKVKQ KEKVGNALRF VVSELDTEKK SRKRAEKTNK
301: KLSIALANTE ASLQAVTKEL ERERKYKRRV EKICNELIRG IDEDKAEVQA LKRETEKAQE ELQKEREMLQ LADEWREQRV QMKLLEARVQ FEEKNAAVNQ
401: LRDELQAYLD TKKEQEPLND PMELSHASEI GNTAADLVPD RNGGNISEDA SEGSDIHSIE LNVDGINRTY TWSYTPSSKG RQRSPSRHEP FSDRGMDGVN
501: SWRLEQSFRD MDEELEGDWA EGCSNGMLNL DHDEERYLAI KNLREQMLAG SGFILSQGRE NAKREYCGL
101: FWQNMGSGGL LDGDAAAARR SLVLWSGAST KVSKRSRSKS KVLEADGKGS RRNGHPRWFS ADLMSNGSAM EVGTFSQDDV SRCPEKTVNL DDLQNSLIAA
201: KELVKVLAHI WGPGELNPSS ASLISALRSE LDVARSHVRK LIKEQKSDAF EIEDLKLQLT EELESWKVKQ KEKVGNALRF VVSELDTEKK SRKRAEKTNK
301: KLSIALANTE ASLQAVTKEL ERERKYKRRV EKICNELIRG IDEDKAEVQA LKRETEKAQE ELQKEREMLQ LADEWREQRV QMKLLEARVQ FEEKNAAVNQ
401: LRDELQAYLD TKKEQEPLND PMELSHASEI GNTAADLVPD RNGGNISEDA SEGSDIHSIE LNVDGINRTY TWSYTPSSKG RQRSPSRHEP FSDRGMDGVN
501: SWRLEQSFRD MDEELEGDWA EGCSNGMLNL DHDEERYLAI KNLREQMLAG SGFILSQGRE NAKREYCGL
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.