Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016876_P001 | Maize | nucleus, plastid | 71.65 | 58.46 |
| KXG30464 | Sorghum | nucleus, plastid | 67.68 | 52.61 |
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 53.96 | 47.84 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 92.99 | 45.93 |
| Os02t0565000-01 | Rice | nucleus | 57.62 | 45.11 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 55.18 | 43.51 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 54.57 | 43.03 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 53.35 | 41.87 |
| Zm00001d025514_P001 | Maize | nucleus | 48.78 | 40.82 |
| Zm00001d003549_P001 | Maize | nucleus | 45.43 | 38.7 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 30.49 | 29.33 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 30.18 | 27.35 |
| Zm00001d030350_P001 | Maize | nucleus | 17.38 | 27.14 |
| Zm00001d043902_P001 | Maize | nucleus | 26.22 | 27.04 |
| Zm00001d011571_P001 | Maize | cytosol | 25.3 | 26.35 |
| CDY33246 | Canola | nucleus | 24.39 | 26.14 |
| Zm00001d038994_P001 | Maize | cytosol | 26.83 | 25.66 |
| CDY61477 | Canola | nucleus, plastid | 23.17 | 25.25 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 31.1 | 25.25 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 27.74 | 25.0 |
| KRH47662 | Soybean | nucleus, plastid | 27.74 | 24.73 |
| Solyc03g122030.1.1 | Tomato | nucleus | 27.13 | 24.52 |
| KRH06239 | Soybean | nucleus | 27.44 | 24.32 |
| CDY39101 | Canola | nucleus, plastid | 22.56 | 24.26 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 22.26 | 24.25 |
| Bra021536.1-P | Field mustard | nucleus | 22.56 | 24.18 |
| CDY39099 | Canola | nucleus | 23.17 | 23.97 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 22.56 | 23.87 |
| CDY02487 | Canola | nucleus, plastid | 22.26 | 23.7 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 26.52 | 23.32 |
| CDX75751 | Canola | nucleus | 25.3 | 22.31 |
| CDY51405 | Canola | nucleus | 8.54 | 22.05 |
| CDY08216 | Canola | nucleus | 21.95 | 21.95 |
| Bra030909.1-P | Field mustard | nucleus | 8.54 | 21.88 |
| Bra014370.1-P | Field mustard | nucleus | 22.26 | 21.79 |
| CDY26148 | Canola | nucleus, plastid | 22.87 | 21.01 |
| AT3G14180.1 | Thale cress | nucleus | 27.44 | 20.32 |
| AT1G54060.1 | Thale cress | nucleus | 22.87 | 19.58 |
| CDY33093 | Canola | cytosol, plastid | 22.56 | 16.93 |
| Zm00001d011730_P001 | Maize | nucleus, plastid | 17.68 | 16.57 |
Protein Annotations
| EnsemblPlants:Zm00001d010753_P001 | EnsemblPlants:Zm00001d010753_T001 | EnsemblPlantsGene:Zm00001d010753 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 |
| PFAM:PF13837 | ProteinID:AQK94788.1 | SEG:seg | UniParc:UPI000844808B | UniProt:A0A1D6FTC6 | MapMan:15.5.20 |
Description
Trihelix transcription factor ASIL2
Coordinates
chr8:-:126886521..126888573
Molecular Weight (calculated)
36089.6 Da
IEP (calculated)
11.319
GRAVY (calculated)
-0.807
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYRMENDVP AAAIPGGARG GRGGSSTASA TSSTLIDAWG ERFVALDRGS LRHPQWQEVA EVVSSRDSYS KAPKSDVQCK NRIDTLKKKY KVKKAKHDSD
101: WRYFDRLDDL LAPVLLKPNS SSSSAAAATA AAAARSAGPM VPPRINFPQR TRTPLHSSAG AKWRMPSPLP QPSASSDSSD GFPPSAVANG KRQRVEEPAA
201: AAADNGAESS VSRAQGLREL AQAIRRLGEV YERVESAKRD QELRMERERL DSARQLEEQR VQFSTSMPRS SRITRTAQAP PGAMTTAATR TRKLRRMRKT
301: KRKRASDCSP LQQWNDFLRA RSVWPGMA
101: WRYFDRLDDL LAPVLLKPNS SSSSAAAATA AAAARSAGPM VPPRINFPQR TRTPLHSSAG AKWRMPSPLP QPSASSDSSD GFPPSAVANG KRQRVEEPAA
201: AAADNGAESS VSRAQGLREL AQAIRRLGEV YERVESAKRD QELRMERERL DSARQLEEQR VQFSTSMPRS SRITRTAQAP PGAMTTAATR TRKLRRMRKT
301: KRKRASDCSP LQQWNDFLRA RSVWPGMA
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAAL DYGMMDFPSY F
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.