Factsheet for Zm00001d018469_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07748	Sorghum	plastid	89.83	88.91
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	82.16	83.54
TraesCS6A01G386700.1	Wheat	cytosol	81.95	83.51
TraesCS6D01G371300.1	Wheat	cytosol	81.74	83.3
TraesCS6B01G425800.1	Wheat	cytosol	81.54	82.56
HORVU6Hr1G090270.1	Barley	cytosol, peroxisome, plastid	79.88	78.57
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	53.73	55.46
Bra010051.1-P	Field mustard	cytosol	48.76	52.22
CDY00247	Canola	cytosol	48.76	52.22
CDX86937	Canola	cytosol	48.76	52.11
KRH24351	Soybean	cytosol	49.38	51.52
AT5G62030.1	Thale cress	cytosol	48.13	51.21
VIT_00s0270g00100.t01	Wine grape	plastid	48.76	50.98
KRH39817	Soybean	cytosol	48.76	50.32
Solyc06g066300.1.1	Tomato	cytosol	48.13	48.03
PGSC0003DMT400043231	Potato	cytosol	47.3	47.4
Zm00001d034797_P002	Maize	cytosol	15.77	14.18

Protein Annotations

EntrezGene:100284663	MapMan:17.5.2.2.1	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	ProteinID:AQK76096.1
UniProt:B6TW72	InterPro:DPH1/DPH2	InterPro:DPH1/DPH2_euk_archaea	EMBL:EU969237	GO:GO:0006412	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0017183	GO:GO:0019538
PFAM:PF01866	PIRSF:PIRSF004967	PANTHER:PTHR10762	PANTHER:PTHR10762:SF1	TIGRFAMs:TIGR00322	UniParc:UPI000160B772
EnsemblPlantsGene:Zm00001d018469	EnsemblPlants:Zm00001d018469_P001	EnsemblPlants:Zm00001d018469_T001	SEG:seg	:	:

Description

Diphthamide biosynthesis protein 1

Coordinates

chr5:-:221354163..221357368

Molecular Weight (calculated)

51900.3 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.052

Length

482 amino acids

Sequence
(BLAST)

001: MDAGDASTAL ALTAAEPSPP SPNRRGKRPT NPPKRFVHTP IPPSILSDPT LAAAATSLLP ANYNFELHKT AHRIRSAAAR RVALQLPEGL LLFALPLSHL
101: LAPYLEPGAD NDVLVLADAT YGACCLADRP ARALAADLLV HYGHSCLVPV TASLLPVLYV FVEIRVDAAR LAAAVRAAFP DPAAAPRLAI AGTVQFIAAV
201: HAAREMLTVE GYHDIVVPQA KPLSAGEILG CTAPTLKKSE EVGAVVFVAD GRFHLEAFMI ANPGVKAYRF DPFLGVLVLE EYDHVGMKQA RKAAVLAARK
301: AKSWGVVLGT LGRQGSTKVL DRVVEHLEEK ELEHTVVLMS ELSPARMELF GDSIDAWVQI ACPRLSIDWG EGFKKPVLTT FEFDVALGYV PGWWEKGSRG
401: CGSECGVGCC SGSGTRGNCN CSDGDYGGDY PMDYYSQDGG DWNSCYMKKK PSTGERKLRV RIGNEIQAEE KRGNQDSREL VR

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.