CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24351	Soybean	cytosol	81.37	82.25
Bra010051.1-P	Field mustard	cytosol	64.03	66.44
CDY00247	Canola	cytosol	64.03	66.44
CDX86937	Canola	cytosol	63.38	65.63
AT5G62030.1	Thale cress	cytosol	63.17	65.12
VIT_00s0270g00100.t01	Wine grape	plastid	64.03	64.86
Solyc06g066300.1.1	Tomato	cytosol	63.17	61.08
PGSC0003DMT400043231	Potato	cytosol	62.31	60.5
TraesCS6D01G371300.1	Wheat	cytosol	50.32	49.68
TraesCS6A01G386700.1	Wheat	cytosol	50.11	49.47
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	49.46	49.46
TraesCS6B01G425800.1	Wheat	cytosol	50.32	49.37
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	49.68	48.95
Zm00001d018469_P001	Maize	cytosol, plastid	50.32	48.76
EES07748	Sorghum	plastid	50.32	48.25
HORVU6Hr1G090270.1	Barley	cytosol, peroxisome, plastid	49.68	47.35
KRH23572	Soybean	cytosol	13.92	15.62
KRH09732	Soybean	cytosol, mitochondrion, nucleus	17.77	14.56

Protein Annotations

EntrezGene:100797181	MapMan:17.5.2.2.1	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	EMBL:ACUP02005959
InterPro:DPH1/DPH2	InterPro:DPH1/DPH2_euk_archaea	EnsemblPlantsGene:GLYMA_09G222400	GO:GO:0006412	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0017183	GO:GO:0019538	UniProt:I1L5G1
EnsemblPlants:KRH39817	ProteinID:KRH39817	ProteinID:KRH39817.1	PFAM:PF01866	PIRSF:PIRSF004967	PANTHER:PTHR10762
PANTHER:PTHR10762:SF1	TIGRFAMs:TIGR00322	UniParc:UPI00023382DF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:44321180..44323367

Molecular Weight (calculated)

51503.0 Da

IEP (calculated)

6.067

GRAVY (calculated)

-0.058

Length

467 amino acids

Sequence
(BLAST)

001: MEKPAEAENV LVLPPHKQPD NDDNNNNNRP KPKPKRFVKN QIPESILNDP VLNAAISVLP SNYNFEVHKC VWRVLSSGAK RVALQFPEGL LMYSLPLSDI
101: LTSFAAVTHC YVLGDVTYGA CCVDDLAASA LGADLLIHYG HSCLVPIDST TIPCLYIFVD IKIDVPHFVD TLILNLHKAK TLVIAGTIQF ASAIRTAKPQ
201: LEELGFRVLI PQSKPLSAGE VLGCTAPKVS SKLLGDDGES SVLVFVADGR FHLEAFMIAN PGIRAFRYDP YMGKLFLEEY DHLGMKRSRK NAIFKAREEA
301: RSWGLVLGTL GRQGNPRILE RLEKMMRDRG FDYTVVLMSE MSPARIALFE DSIDAWIQIA CPRLSIDWGE AFVKPVLTPF EADIALGVIP GWWEKNNEVV
401: CCNKSGSCCG DAKGGGEDFG GDYPMDYYAQ DGGEWNSSYV IKSTRPPARR VFVVSSVADT TAISQQP

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.