Factsheet for Solyc06g066300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043231	Potato	cytosol	89.65	90.02
AT5G62030.1	Thale cress	cytosol	61.7	65.78
Bra010051.1-P	Field mustard	cytosol	60.66	65.11
CDY00247	Canola	cytosol	60.66	65.11
VIT_00s0270g00100.t01	Wine grape	plastid	62.11	65.08
CDX86937	Canola	cytosol	60.66	64.97
KRH24351	Soybean	cytosol	61.28	64.07
KRH39817	Soybean	cytosol	61.08	63.17
TraesCS6A01G386700.1	Wheat	cytosol	49.07	50.11
TraesCS6B01G425800.1	Wheat	cytosol	49.07	49.79
TraesCS6D01G371300.1	Wheat	cytosol	48.45	49.47
Os02t0815600-01	Rice	cytosol, endoplasmic reticulum, peroxisome	47.83	48.73
HORVU6Hr1G090270.1	Barley	cytosol, peroxisome, plastid	49.07	48.37
Zm00001d018469_P001	Maize	cytosol, plastid	48.03	48.13
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	46.17	47.75
EES07748	Sorghum	plastid	48.03	47.64
Solyc10g081540.1.1	Tomato	cytosol	16.77	16.27

Protein Annotations

MapMan:17.5.2.2.1	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	InterPro:DPH1/DPH2	InterPro:DPH1/DPH2_euk_archaea
GO:GO:0006412	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0017183	GO:GO:0019538	UniProt:K4C7Q6	PFAM:PF01866	PIRSF:PIRSF004967	PANTHER:PTHR10762
PANTHER:PTHR10762:SF1	EnsemblPlantsGene:Solyc06g066300.1	EnsemblPlants:Solyc06g066300.1.1	TIGRFAMs:TIGR00322	UniParc:UPI0002765D92	SEG:seg

Description

No Description!

Coordinates

chr6:-:41589202..41590653

Molecular Weight (calculated)

53431.9 Da

IEP (calculated)

6.129

GRAVY (calculated)

-0.177

Length

483 amino acids

Sequence
(BLAST)

001: MEKEHGGLLP LNPTPAAAAS ATTAVDAGDQ QSLQQSTRPR PKRFVKNQIP DSILNDAALN AAISLLPQNY NFEIHKCVWR VRTSSAKRVA LQFPEGLLMY
101: SLIISDILST FTSATHCFIL GDVTFGACCV DDLSAGALSA DLLIHFGHSC LVPIDSTTIP CLYIFVEISI DVHRLLNELK LNFYNSDTYD NIIMAGTIQF
201: ASAIRAVKPE LEKLGFSILI PQAKPLSAGE VLGCTAPSVK NRFSDGENVV LIFVADGRFH LEAFMIANPG IKTYRYDPFI GKLFVEEYDH KGMKEERKRA
301: IEKARGAKNW GIVLGTLGRQ GNPRILDRLE KKMSEKGMTW TVVLMSEISP TRIALFEDAV DAWIQIACPR LSIDWGDAFK KPLLTPFEAE IALGDLSGWW
401: ERTTSKNSDI CRDEVMKCSK NESCGACDKS GEEVKEETQV DYPMDYYAQD GGEWNSCYSK KPARLSQRNS QSCNGATAIK SNS

Best Arabidopsis Sequence Match ( AT5G62030.1 )
(BLAST)

001: MELSDPNNGK TNKPKQPPKR FIKNQIPDSI LGDASLNAAI SILPSIYHFE VHKCVWRIKT SNAKRIALQL PEGLLMYALT LSDIFTSFAG ASHCFVLGDV
101: TYGACCVDDF SACALGADLL IHYGHSCLVP IDSTKIPCLY VFVEIQIDVK CLLNTIHLNL ASDVKNIILA GTIQFTSAIR AVKPELEKQG FNVLIPQSKP
201: LSAGEVLGCT APKVKTVEDC KDQVLVFVAD GRFHLEAFMI ANPKIKAFRY DPYLGKLFLE EYDHKGMRET RMRAIARARE AKTWGIVLGT LGRQGNPKIL
301: ERLEKKMMEK GIDSTVVLMS ELSPTRVALF EDSVDAWVQI ACPRLSIDWG EAFLKPLLTT FEAEIALGFI RGWWENDSSS RVNSSSGCCK EDKETSCACK
401: NENVKDDKKD NDGALDGDYP MDYYAQEGGE WNSSYLKKSS RPIRRNPLPS SVV

Arabidopsis Description

Diphthamide synthesis DPH2 family protein [Source:UniProtKB/TrEMBL;Acc:Q8RWW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.