Factsheet for Solyc10g081540.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072523	Potato	cytosol	95.18	95.18
VIT_05s0094g00370.t01	Wine grape	cytosol	60.44	59.49
KRH23572	Soybean	cytosol	48.39	57.93
Bra007464.1-P	Field mustard	cytosol	55.22	56.47
CDX71889	Canola	nucleus	55.02	55.8
AT3G59630.2	Thale cress	cytoskeleton, cytosol, nucleus	52.61	53.36
GSMUA_Achr1P13430_001	Banana	cytosol	53.01	51.97
KRH09732	Soybean	cytosol, mitochondrion, nucleus	57.03	49.82
Os11t0265600-00	Rice	cytosol	49.8	49.01
TraesCS4B01G083800.1	Wheat	cytosol, mitochondrion	48.59	47.73
EER90542	Sorghum	cytosol	49.0	47.47
Zm00001d034797_P002	Maize	cytosol	48.59	45.15
HORVU4Hr1G013960.2	Barley	plastid	49.2	43.91
CDY70834	Canola	cytosol	19.08	43.78
CDY69029	Canola	cytosol	19.08	43.18
Solyc06g066300.1.1	Tomato	cytosol	16.27	16.77

Protein Annotations

MapMan:17.5.2.2.2	Gene3D:3.40.50.11840	Gene3D:3.40.50.11850	Gene3D:3.40.50.11860	InterPro:DHP2_euk	InterPro:DPH1/DPH2
GO:GO:0005575	GO:GO:0006412	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0017183	GO:GO:0019538	UniProt:K4D341
PFAM:PF01866	PANTHER:PTHR10762	PANTHER:PTHR10762:SF2	EnsemblPlantsGene:Solyc10g081540.1	EnsemblPlants:Solyc10g081540.1.1	TIGRFAMs:TIGR00322
TMHMM:TMhelix	UniParc:UPI00027698EB	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:62579660..62585940

Molecular Weight (calculated)

54988.6 Da

IEP (calculated)

5.233

GRAVY (calculated)

-0.104

Length

498 amino acids

Sequence
(BLAST)

001: MDLESTYEID RVAGFISARG FRRVALQFPD NLLKDSTRIV AALHEKLRSF SQLHAGRNGD AKDVKLYVMA DTMYGNCCVD EVGASHANAD CVIHYGHTCF
101: SPTSTLPAFL VLGKASLNVP LCAQTLCKYT IKAGKPILVL YGLEYTHTIT EIKASVGAQV CSELEVHYAD IISPIITPPE TFSSMNEQPE LSDGQCANGC
201: SIEVNDAIYC VGGLTWSLPV GHRIEDYLIF YVGSDDPAFA NILMTYNACE IVRYDATEDK LVNEFSQQKR ILKRRYFLIE KAKDASIIGI LVGTLGVAGY
301: LHMIHQMKDL ITRAGKKAYT FVMGRPNPAK LANFPECDIF VYVSCAQTAL LDSKEFLAPV ITPFEAMIAF GRGSEWTGAY VTEFRDLITS SPMEAKNQSE
401: ARFSFIQGGY VEDVEQQEVE EVEDGVSALV NITEKALRVR DKDSQTLMPG TAKSGAEYFA TRSYHGLDIH PENNFSEPFL IGKSGRASGY RNETAQKS

Best Arabidopsis Sequence Match ( AT3G59630.1 )
(BLAST)

001: MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP
101: AFFVFGKASI NVSSCVKHLI DYASKSDKPI MILYGLEYAH VIPQIREELG LSKTDSQLSV ANVLCSFISP SKDPRESMEH PRPYSESDSS DSLSSSRSYR
201: LGGLTWDLPE GSKIEDYLLF WIGSDSSAFA NVVLTFNGCD IVRYDAEEDS LVTEFYQQRR ILKRRYYLVE KAKDANIIGI LVGTLGVAGY LHMIHHMQAL
301: ISAAGKKSYI LAMGRPNPAK LANFPECDVF IYISCAQTAL LDSKEFMSPV ITPFEANLAF SRGSEWTGAY LMHFQDVINS VKSESEAHIG SEEPRFSFFQ
401: GGYVEDHKTN DQAKNGEEDT GETMTLVQAA EKALQLRGND HNSLTKQTAA KSGPEYFLNR VYRGLEINSE NTLPEPYIVG RSGKASGYKH E

Arabidopsis Description

AT3g59630/T16L24_180 [Source:UniProtKB/TrEMBL;Acc:Q9M1A5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.