Factsheet for TraesCS4B01G083800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G013960.2	Barley	plastid	93.49	84.95
Os11t0265600-00	Rice	cytosol	78.7	78.85
EER90542	Sorghum	cytosol	72.98	71.98
Zm00001d034797_P002	Maize	cytosol	71.01	67.16
GSMUA_Achr1P13430_001	Banana	cytosol	58.58	58.46
VIT_05s0094g00370.t01	Wine grape	cytosol	54.64	54.74
Bra007464.1-P	Field mustard	cytosol	51.08	53.18
CDX71889	Canola	nucleus	51.28	52.95
AT3G59630.2	Thale cress	cytoskeleton, cytosol, nucleus	49.7	51.32
KRH23572	Soybean	cytosol	41.62	50.72
PGSC0003DMT400072523	Potato	cytosol	47.93	48.8
Solyc10g081540.1.1	Tomato	cytosol	47.73	48.59
KRH09732	Soybean	cytosol, mitochondrion, nucleus	51.48	45.79
CDY69029	Canola	cytosol	19.33	44.55
CDY70834	Canola	cytosol	18.93	44.24
TraesCS6B01G425800.1	Wheat	cytosol	13.61	14.5

Protein Annotations

EnsemblPlants:TraesCS4B01G083800.1	EnsemblPlantsGene:TraesCS4B01G083800	Gene3D:3.40.50.11840	Gene3D:3.40.50.11860	GO:GO:0006412	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0017183	GO:GO:0019538
InterPro:DHP2_euk	InterPro:DPH1/DPH2	PANTHER:PTHR10762	PANTHER:PTHR10762:SF2	PFAM:PF01866	SEG:seg
TIGRFAMs:TIGR00322	MapMan:17.5.2.2.2	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:82313661..82318547

Molecular Weight (calculated)

55577.5 Da

IEP (calculated)

4.807

GRAVY (calculated)

-0.278

Length

507 amino acids

Sequence
(BLAST)

001: MDDVSSRYEI PRTAEFLRRR AYTRVALQFP DELLKDAAAV ARALRAELGG GAKLFVMADT AYNSCCVDEV GASNIDAQCV VHYGHSCMXX TSNLPAFFVF
101: GKAPLDISSC CRSLLDCSRE SSKPVLVLCG LEYAHALDDL KRATLELCKS DCQNSEIHYA EVLCSEMSPS SSPTAEEQCS QSNGSTHNDG LPADNDDLAT
201: LVNSCCNVEG STRKYNLGGL TWRISTDEKM DDYLLYWIGQ DNSAFANVAL TFNKCDIVRY DTVANQFSRD VSHLMKILRR RYYLVEKAKD ANIVGILVGT
301: LGVAGYLDII EQMKNLIKAA GKKSYTLVMG RPNSAKLANF PECEVFVYVS CAQTALLDSK ELLAPVITPF EAVLAFSRGR EWTGEYLLDF KELISSEKPE
401: VASKSEEARF SFIKGGYVED DRPQENEEHS ETSLALAELT EKALSTRNQN SDAVLYQGGA KSAIEYLKAR SYRGMTGEYE GPAPDSVLIG RTGRAAGYSD
501: EKTKSPE

Best Arabidopsis Sequence Match ( AT3G59630.1 )
(BLAST)

001: MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP
101: AFFVFGKASI NVSSCVKHLI DYASKSDKPI MILYGLEYAH VIPQIREELG LSKTDSQLSV ANVLCSFISP SKDPRESMEH PRPYSESDSS DSLSSSRSYR
201: LGGLTWDLPE GSKIEDYLLF WIGSDSSAFA NVVLTFNGCD IVRYDAEEDS LVTEFYQQRR ILKRRYYLVE KAKDANIIGI LVGTLGVAGY LHMIHHMQAL
301: ISAAGKKSYI LAMGRPNPAK LANFPECDVF IYISCAQTAL LDSKEFMSPV ITPFEANLAF SRGSEWTGAY LMHFQDVINS VKSESEAHIG SEEPRFSFFQ
401: GGYVEDHKTN DQAKNGEEDT GETMTLVQAA EKALQLRGND HNSLTKQTAA KSGPEYFLNR VYRGLEINSE NTLPEPYIVG RSGKASGYKH E

Arabidopsis Description

AT3g59630/T16L24_180 [Source:UniProtKB/TrEMBL;Acc:Q9M1A5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.