Factsheet for GSMUA_Achr1P13430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90542	Sorghum	cytosol	59.65	58.95
TraesCS4B01G083800.1	Wheat	cytosol, mitochondrion	58.46	58.58
Os11t0265600-00	Rice	cytosol	57.87	58.1
VIT_05s0094g00370.t01	Wine grape	cytosol	57.87	58.1
Zm00001d034797_P002	Maize	cytosol	57.68	54.66
KRH23572	Soybean	cytosol	44.49	54.33
Bra007464.1-P	Field mustard	cytosol	51.18	53.39
Solyc10g081540.1.1	Tomato	cytosol	51.97	53.01
CDX71889	Canola	nucleus	51.18	52.95
HORVU4Hr1G013960.2	Barley	plastid	58.07	52.87
PGSC0003DMT400072523	Potato	cytosol	51.18	52.21
AT3G59630.2	Thale cress	cytoskeleton, cytosol, nucleus	50.0	51.73
KRH09732	Soybean	cytosol, mitochondrion, nucleus	53.94	48.07
CDY70834	Canola	cytosol	19.09	44.7
CDY69029	Canola	cytosol	18.5	42.73
GSMUA_Achr5P17750_001	Banana	mitochondrion, plasma membrane	14.37	15.63

Protein Annotations

MapMan:17.5.2.2.2	Gene3D:3.40.50.11840	Gene3D:3.40.50.11860	InterPro:DHP2_euk	InterPro:DPH1/DPH2	GO:GO:0003674
GO:GO:0003824	GO:GO:0006412	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0017183	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G13430_001	EnsemblPlants:GSMUA_Achr1P13430_001
EnsemblPlants:GSMUA_Achr1T13430_001	UniProt:M0RZK1	PFAM:PF01866	PANTHER:PTHR10762	PANTHER:PTHR10762:SF2	TIGRFAMs:TIGR00272
TIGRFAMs:TIGR00322	UniParc:UPI0002968B87	:	:	:	:

Description

Putative Diphthamide biosynthesis protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G13430_001]

Coordinates

chr1:+:10259250..10270832

Molecular Weight (calculated)

56208.0 Da

IEP (calculated)

6.151

GRAVY (calculated)

-0.195

Length

508 amino acids

Sequence
(BLAST)

001: MDFELNYEIS RTVDYLRAGN FTRVALQFPD ELLKDSPRVA KALRSELGAG VRLFVMADAA YGSCCVDEIG ASHVDAECVV HYGHACMSPT STLPAMFVFG
101: KASIDIKDCA DLIGHCLSST NKPILVLYGL EYSHALMHLK AVVAESLVLS HSNWGPMVKY SDVIGSVINP SQDCTTEKDQ IRSLNGSITN AGFTSGRDEK
201: KILKFGNGRR MENGTCFELG GLTWSIPSDH KIEDYLLFWI GPENSAFTNV VLTFNNCEII RYDADERRLL EDTSCQRRIL KRRYYLVEKA KDANIVGILV
301: GTLGCAGYLS IIQQMKELIK GAGKKSYTLV MGRPNSAKLA NFPECDVFVY VSCAQTALLD SKEFLAPIIT PFEAALAFGR GRQWTGEYVL NFHDLMVSSG
401: PEAVSGTKEA RFSFIKGGYM EDIQPEENGE HEERSLALAE TTEKALNLQS QHPNTIMFKG AARSGSEFFA ARSYQGLNRQ YENLAPQSYV IGRSGRASGY
501: ADEKMQEK

Best Arabidopsis Sequence Match ( AT3G59630.1 )
(BLAST)

001: MELEFESKYE INRTAEFIIS KSFTRIALQF PDELLKDSTK VVSALKSKTR LLTDREVRFF VMADTTYGSC CIDEVGALHI DSECVVHYGQ TCLSPTSVLP
101: AFFVFGKASI NVSSCVKHLI DYASKSDKPI MILYGLEYAH VIPQIREELG LSKTDSQLSV ANVLCSFISP SKDPRESMEH PRPYSESDSS DSLSSSRSYR
201: LGGLTWDLPE GSKIEDYLLF WIGSDSSAFA NVVLTFNGCD IVRYDAEEDS LVTEFYQQRR ILKRRYYLVE KAKDANIIGI LVGTLGVAGY LHMIHHMQAL
301: ISAAGKKSYI LAMGRPNPAK LANFPECDVF IYISCAQTAL LDSKEFMSPV ITPFEANLAF SRGSEWTGAY LMHFQDVINS VKSESEAHIG SEEPRFSFFQ
401: GGYVEDHKTN DQAKNGEEDT GETMTLVQAA EKALQLRGND HNSLTKQTAA KSGPEYFLNR VYRGLEINSE NTLPEPYIVG RSGKASGYKH E

Arabidopsis Description

AT3g59630/T16L24_180 [Source:UniProtKB/TrEMBL;Acc:Q9M1A5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.